RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 TSGA10IPQ3SY00 556 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 USH1GQ495M9 461 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 NSMFQ6X4W1 530 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 ZNF467Q7Z7K2 595 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-210ENST00000428861 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 CCDC144CPQ8IYA2 1237 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 ANKLE1Q8NAG6 615 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 KCNB2Q92953 911 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 MTMR8Q96EF0 704 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 TCEANC2Q96MN5 208 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-210ENST00000428861 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 PFASO15067 1338 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 SYNGAP1Q96PV0 1343 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 LCTP09848 1927 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 ERICH2A1L162 156 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 COL6A1P12109 1028 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 CPA1P15085 419 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 RXRAP19793 462 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 PTGS1P23219 599 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 EXOSC10Q01780 885 aaKnown RBP12.53□□□□□ -0.4
ATG4B-210ENST00000428861 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 MSL3Q8N5Y2 521 aaKnown RBP12.53□□□□□ -0.4
ATG4B-210ENST00000428861 NUP133Q8WUM0 1156 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 NEK1Q96PY6 1258 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 NRBP1Q9UHY1 535 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 FRMPD3Q5JV73 1810 aa12.53□□□□□ -0.4
ATG4B-210ENST00000428861 OPLAHO14841 1288 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 HSPA4P34932 840 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
ATG4B-210ENST00000428861 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-210ENST00000428861 ACVR2BQ13705 512 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.41
ATG4B-210ENST00000428861 TMEM63BQ5T3F8 832 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 GJC2Q5T442 439 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-210ENST00000428861 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 PIGSQ96S52 555 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 MTA3Q9BTC8 594 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 C11orf49Q9H6J7 331 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 ZHX1Q9UKY1 873 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-210ENST00000428861 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 MCM3APO60318 1980 aa12.52□□□□□ -0.41
ATG4B-210ENST00000428861 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-210ENST00000428861 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
ATG4B-210ENST00000428861 MSCO60682 206 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 CAPN2P17655 700 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 CALML3P27482 149 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 LIFRP42702 1097 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 RNF20Q5VTR2 975 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
ATG4B-210ENST00000428861 COL20A1Q9P218 1284 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 CNPY2Q9Y2B0 182 aa12.51□□□□□ -0.41
ATG4B-210ENST00000428861 BAZ2BQ9UIF8 2168 aaKnown RBP12.51□□□□□ -0.41
ATG4B-210ENST00000428861 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 MYADML2A6NDP7 307 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 ZBTB5O15062 677 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 DDAH1O94760 285 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 PGK1P00558 417 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 AKR1A1P14550 325 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 ALDH5A1P51649 535 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-210ENST00000428861 LRRC41Q15345 812 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
ATG4B-210ENST00000428861 NFXL1Q6ZNB6 911 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 DHX32Q7L7V1 743 aaKnown RBP12.5□□□□□ -0.41
ATG4B-210ENST00000428861 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 FBXO16Q8IX29 292 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-210ENST00000428861 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
ATG4B-210ENST00000428861 MORC4Q8TE76 937 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 PIBF1Q8WXW3 757 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 DPF3Q92784 378 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 BRPF3Q9ULD4 1205 aa12.5□□□□□ -0.41
ATG4B-210ENST00000428861 ABCB11O95342 1321 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 H0YGN5 161 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 DNM1LO00429 736 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 ADAMTS4O75173 837 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 RARBP10826 455 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 LRRC26Q2I0M4 334 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 TAPT1Q6NXT6 567 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
ATG4B-210ENST00000428861 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-210ENST00000428861 JAKMIP1Q96N16 626 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms