RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 INHAP05111 366 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 GOLGA8HP0CJ92 632 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 SCG2P13521 617 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 UBXN2AP68543 259 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 SHROOM1Q2M3G4 852 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 GALNT17Q6IS24 598 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 BTNL9Q6UXG8 535 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 CLEC17AQ6ZS10 378 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 FASTKD5Q7L8L6 764 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 FAM160B2Q86V87 743 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 CLEC10AQ8IUN9 316 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 ACER1Q8TDN7 264 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 FEM1BQ9UK73 627 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 DOCK1Q14185 1865 aa9.51□□□□□ -0.89
SMARCAL1-206ENST00000427645 PNMA6FA0A0J9YX94 578 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 WDR46O15213 610 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 CYTH3O43739 400 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 FARP2O94887 1054 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 SGPL1O95470 568 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 F13A1P00488 732 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 FDX1P10109 184 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 CALML3P27482 149 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 STAT2P52630 851 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 BACE1P56817 501 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 SPP2Q13103 211 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 PKN1Q16512 942 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 ATL3Q6DD88 541 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 KCTD1Q719H9 257 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 SLAIN1Q8ND83 568 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 TNPO1Q92973 898 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 UBA5Q9GZZ9 404 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 VAT1LQ9HCJ6 419 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 PNMA2Q9UL42 364 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 ZDHHC9Q9Y397 364 aa9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 FRMPD2Q68DX3 1309 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-206ENST00000427645 LAMA3Q16787 3333 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 TMEM232C9JQI7 657 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 GOLGA6L22H0YM25 854 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 ZBTB5O15062 677 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 PTMSP20962 102 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 GNA11P29992 359 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 TRIM32Q13049 653 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 IKQ13123 557 aaPredicted RBP9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 GNL2Q13823 731 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 PKP1Q13835 747 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 SH3D19Q5HYK7 790 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 KRT40Q6A162 431 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 MCTP1Q6DN14 999 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 BRAPQ7Z569 592 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 TEX2Q8IWB9 1127 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 ADGRF4Q8IZF3 695 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 PRPF38AQ8NAV1 312 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 DIS3LQ8TF46 1054 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 MTMR8Q96EF0 704 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 PAWRQ96IZ0 340 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 C12orf42Q96LP6 360 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 HTATIP2Q9BUP3 242 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 GLT8D2Q9H1C3 349 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 JMJD4Q9H9V9 463 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 TMOD4Q9NZQ9 345 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 ISY1Q9ULR0 285 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 AGTPBP1Q9UPW5 1226 aa9.49□□□□□ -0.89
SMARCAL1-206ENST00000427645 SOX1O00570 391 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 EVI5O60447 810 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 MMP1P03956 469 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 HMGCS2P54868 508 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 NLRP5P59047 1200 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 MTMR2Q13614 643 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 CSPP1Q1MSJ5 1256 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 SYDE2Q5VT97 1194 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 TTBK2Q6IQ55 1244 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 BICD2Q8TD16 824 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 PIGSQ96S52 555 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 PHF20Q9BVI0 1012 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 FOXP1Q9H334 677 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 PRO3102Q9H379 93 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 C6orf50Q9HD87 102 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 BARHL2Q9NY43 387 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 CFAP45Q9UL16 551 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 NR2E3Q9Y5X4 410 aa9.48□□□□□ -0.89
SMARCAL1-206ENST00000427645 ESYT2A0FGR8 921 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 DTNBO60941 627 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 BAG4O95429 457 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 U2AF2P26368 475 aaKnown RBP eCLIP9.47□□□□□ -0.896e-7■■■■□ 26.4
SMARCAL1-206ENST00000427645 KRT2P35908 639 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 SLC16A2P36021 539 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 GUCY1B3Q02153 619 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 ZYXQ15942 572 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 FAM83BQ5T0W9 1011 aa9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-206ENST00000427645 MCTP2Q6DN12 878 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms