RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CPVLQ9H3G5 476 aa21.56■■□□□ 1.04
GPC1-205ENST00000427506 SPC25Q9HBM1 224 aa21.56■■□□□ 1.04
GPC1-205ENST00000427506 PHF24Q9UPV7 400 aa21.56■■□□□ 1.04
GPC1-205ENST00000427506 SYNRGQ9UMZ2 1314 aa21.55■■□□□ 1.04
GPC1-205ENST00000427506 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
GPC1-205ENST00000427506 NFIBO00712 420 aa21.55■■□□□ 1.04
GPC1-205ENST00000427506 DHX16O60231 1041 aaKnown RBP21.55■■□□□ 1.04
GPC1-205ENST00000427506 ADAMTS4O75173 837 aa21.55■■□□□ 1.04
GPC1-205ENST00000427506 PARP1P09874 1014 aaKnown RBP21.55■■□□□ 1.04
GPC1-205ENST00000427506 KIAA1211Q6ZU35 1233 aa21.55■■□□□ 1.04
GPC1-205ENST00000427506 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
GPC1-205ENST00000427506 CYB5R4Q7L1T6 521 aa21.55■■□□□ 1.04
GPC1-205ENST00000427506 C6orf222P0C671 652 aaPredicted RBP21.54■■□□□ 1.04
GPC1-205ENST00000427506 BMP8BP34820 402 aa21.54■■□□□ 1.04
GPC1-205ENST00000427506 USH1GQ495M9 461 aa21.54■■□□□ 1.04
GPC1-205ENST00000427506 PURBQ96QR8 312 aaKnown RBP21.54■■□□□ 1.04
GPC1-205ENST00000427506 LBHD1Q9BQE6 289 aaPredicted RBP21.54■■□□□ 1.04
GPC1-205ENST00000427506 TSEN34Q9BSV6 310 aaKnown RBP21.54■■□□□ 1.04
GPC1-205ENST00000427506 PCDH10Q9P2E7 1040 aa21.54■■□□□ 1.04
GPC1-205ENST00000427506 ADD3Q9UEY8 706 aaKnown RBP21.54■■□□□ 1.04
GPC1-205ENST00000427506 WDR19Q8NEZ3 1342 aa21.54■■□□□ 1.04
GPC1-205ENST00000427506 SMCHD1A6NHR9 2005 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 A0A1W2PQ45 241 aaPredicted RBP21.53■■□□□ 1.04
GPC1-205ENST00000427506 A0A1W2PQY0 241 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 ERICH2A1L162 156 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 CALML3P27482 149 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 MDM2Q00987 491 aaPredicted RBP21.53■■□□□ 1.04
GPC1-205ENST00000427506 TNFAIP2Q03169 654 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 TRIM60Q495X7 471 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 RNF207Q6ZRF8 634 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 EEPD1Q7L9B9 569 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 ADGRF4Q8IZF3 695 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 NCOA7Q8NI08 942 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 UBE2OQ9C0C9 1292 aaKnown RBP21.53■■□□□ 1.04
GPC1-205ENST00000427506 KATNBL1Q9H079 304 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 VAT1LQ9HCJ6 419 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 PRDM5Q9NQX1 630 aaPredicted RBP21.53■■□□□ 1.04
GPC1-205ENST00000427506 ASTN1O14525 1302 aa21.53■■□□□ 1.04
GPC1-205ENST00000427506 E7EWF7 191 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 IFIT3O14879 490 aaKnown RBP21.52■■□□□ 1.04
GPC1-205ENST00000427506 ADCY6O43306 1168 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 ACLYP53396 1101 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 KCNA10Q16322 511 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 CDC37Q16543 378 aaPredicted RBP21.52■■□□□ 1.04
GPC1-205ENST00000427506 KLHDC9Q8NEP7 349 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 NUP133Q8WUM0 1156 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 CLEC4DQ8WXI8 215 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 MAP4K1Q92918 833 aa21.52■■□□□ 1.04
GPC1-205ENST00000427506 RBM8AQ9Y5S9 174 aaKnown RBP21.52■■□□□ 1.04
GPC1-205ENST00000427506 DDX49Q9Y6V7 483 aaKnown RBP21.52■■□□□ 1.04
GPC1-205ENST00000427506 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.51■■□□□ 1.03
GPC1-205ENST00000427506 MOXD2PA6NHM9 499 aa21.51■■□□□ 1.03
GPC1-205ENST00000427506 ALDH5A1P51649 535 aaPredicted RBP21.51■■□□□ 1.03
GPC1-205ENST00000427506 SART3Q15020 963 aaKnown RBP21.51■■□□□ 1.03
GPC1-205ENST00000427506 SNX17Q15036 470 aa21.51■■□□□ 1.03
GPC1-205ENST00000427506 SEC23AQ15436 765 aa21.51■■□□□ 1.03
GPC1-205ENST00000427506 SLC30A10Q6XR72 485 aa21.51■■□□□ 1.03
GPC1-205ENST00000427506 PCSK9Q8NBP7 692 aaKnown RBP21.51■■□□□ 1.03
GPC1-205ENST00000427506 STARD7Q9NQZ5 370 aa21.51■■□□□ 1.03
GPC1-205ENST00000427506 MYADML2A6NDP7 307 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 GJA9P57773 515 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 IRX5P78411 483 aaPredicted RBP21.5■■□□□ 1.03
GPC1-205ENST00000427506 GNASQ5JWF2 1037 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 C1orf53Q5VUE5 145 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 FBXO16Q8IX29 292 aaPredicted RBP21.5■■□□□ 1.03
GPC1-205ENST00000427506 VTI1AQ96AJ9 217 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 MPHOSPH6Q99547 160 aaKnown RBP21.5■■□□□ 1.03
GPC1-205ENST00000427506 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
GPC1-205ENST00000427506 CST5P28325 142 aaPredicted RBP21.49■■□□□ 1.03
GPC1-205ENST00000427506 RPS6P62753 249 aaKnown RBP21.49■■□□□ 1.03
GPC1-205ENST00000427506 TLE2Q04725 743 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 WTAPQ15007 396 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 IQSEC1Q6DN90 963 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 CHST3Q7LGC8 479 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 STAG2Q8N3U4 1231 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 GLT1D1Q96MS3 346 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 ESYT1Q9BSJ8 1104 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 AP5M1Q9H0R1 490 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 UPF3AQ9H1J1 476 aaKnown RBP21.49■■□□□ 1.03
GPC1-205ENST00000427506 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 PDGFCQ9NRA1 345 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 ABCB11O95342 1321 aa21.49■■□□□ 1.03
GPC1-205ENST00000427506 MCM3APO60318 1980 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 KLRF2D3W0D1 207 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 PQBP1O60828 265 aaKnown RBP21.48■■□□□ 1.03
GPC1-205ENST00000427506 ASGR1P07306 291 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 QRICH1Q2TAL8 776 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 CCSAPQ6IQ19 270 aaPredicted RBP21.48■■□□□ 1.03
GPC1-205ENST00000427506 STOX1Q6ZVD7 989 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 FBXO11Q86XK2 927 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 TDHQ8IZJ6 230 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 MORC4Q8TE76 937 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 JMJD4Q9H9V9 463 aa21.48■■□□□ 1.03
GPC1-205ENST00000427506 LOC102724159A0A0B4J2E5 919 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 B4DLN1 442 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 SMPD1P17405 629 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
GPC1-205ENST00000427506 BEX3Q00994 111 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 PDE4DQ08499 809 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms