RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 TBC1D12O60347 775 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 CCDC13Q8IYE1 715 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 RAPGEF5Q92565 580 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 LRRC39Q96DD0 335 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 MCUBQ9NWR8 336 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 RCVRNP35243 200 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 UBASH3AP57075 661 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 TEFQ10587 303 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 ZSCAN23Q3MJ62 389 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 DDI2Q5TDH0 399 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 FYCO1Q9BQS8 1478 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 WDR47O94967 919 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 SEMA3DO95025 777 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 ADCY2Q08462 1091 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 BFSP2Q13515 415 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 SLC9A5Q14940 896 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 TRIM15Q9C019 465 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 KPNA4O00629 521 aaPredicted RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 SERPINB3P29508 390 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 HOXA7P31268 230 aaPredicted RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 HNRNPH2P55795 449 aaKnown RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 FAM43BQ6ZT52 329 aaPredicted RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 CNNM3Q8NE01 707 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 RUNDC3BQ96NL0 473 aa8.47□□□□□ -1.05
LINC00649-203ENST00000427447 SH2B1Q9NRF2 756 aaPredicted RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 TRMT6Q9UJA5 497 aaKnown RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 KDM5AP29375 1690 aaKnown RBP8.47□□□□□ -1.05
LINC00649-203ENST00000427447 SPAG7O75391 227 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 STX2P32856 288 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 EIF2B2P49770 351 aaKnown RBP8.46□□□□□ -1.05
LINC00649-203ENST00000427447 SPINK5Q9NQ38 1064 aaPredicted RBP8.46□□□□□ -1.05
LINC00649-203ENST00000427447 ZNF652Q9Y2D9 606 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 DNALI1O14645 258 aaPredicted RBP8.46□□□□□ -1.05
LINC00649-203ENST00000427447 ICA1Q05084 483 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 SCYL3Q8IZE3 742 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 DTX3LQ8TDB6 740 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 TRIM75PA6NK02 468 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 CDC37Q16543 378 aaPredicted RBP8.46□□□□□ -1.05
LINC00649-203ENST00000427447 EPC2Q52LR7 807 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 ICA1LQ8NDH6 482 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 BLOC1S5Q8TDH9 187 aa8.46□□□□□ -1.05
LINC00649-203ENST00000427447 NAPGQ99747 312 aaPredicted RBP8.46□□□□□ -1.05
LINC00649-203ENST00000427447 ASNA1O43681 348 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 MX1P20591 662 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 GUCY2FP51841 1108 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 TXNDC11Q6PKC3 985 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 ATF7IPQ6VMQ6 1270 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 CCDC189A1A4V9 331 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 DDX58O95786 925 aaKnown RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 PECAM1P16284 738 aaPredicted RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 CCND1P24385 295 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 AP2B1P63010 937 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 EPS8Q12929 822 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 ELF2Q15723 593 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 DDX17Q92841 729 aaKnown RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 ZFYVE19Q96K21 471 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 RAB17Q9H0T7 212 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 EURLQ9NYK6 297 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 MYH7P12883 1935 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 KAT6AQ92794 2004 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 CBFA2T3O75081 653 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 CYP4A11Q02928 519 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 USF2Q15853 346 aaPredicted RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 CYP4A22Q5TCH4 519 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 STKLD1Q8NE28 680 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 PPWD1Q96BP3 646 aaKnown RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 FAF2Q96CS3 445 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 UPF3AQ9H1J1 476 aaKnown RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 SMCO3A2RU48 225 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 POU5F1Q01860 360 aaKnown RBP8.46□□□□□ -1.06
LINC00649-203ENST00000427447 CCDC103Q8IW40 242 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 FAM178BQ8IXR5 827 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 ZBTB10Q96DT7 871 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 FAM212AQ96EL1 285 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 AP4S1Q9Y587 144 aa8.46□□□□□ -1.06
LINC00649-203ENST00000427447 ATF4P18848 351 aaPredicted RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 RFX1P22670 979 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 ADSLP30566 484 aaPredicted RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 CCT3P49368 545 aaKnown RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 BTN3A2P78410 334 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 KCTD21Q4G0X4 260 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 EFCAB2Q5VUJ9 269 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 NAIF1Q69YI7 327 aaPredicted RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 TRIM74Q86UV6 250 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 TRIM73Q86UV7 250 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 MINDY2Q8NBR6 621 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 TUBA1CQ9BQE3 449 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 PPANQ9NQ55 473 aaKnown RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 RGS16O15492 202 aaPredicted RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 HNRNPRO43390 633 aaKnown RBP8.45□□□□□ -1.06
LINC00649-203ENST00000427447 ECEL1O95672 775 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 CHRNA3P32297 505 aa8.45□□□□□ -1.06
LINC00649-203ENST00000427447 ALDH18A1P54886 795 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms