RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 A0A1W2PPC1 479 aa20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 ASB14A6NK59 587 aa20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 DHX16O60231 1041 aaKnown RBP20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 LRRC26Q2I0M4 334 aa20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 STOX1Q6ZVD7 989 aa20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 FAM184BQ9ULE4 1060 aa20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 ZMYND8Q9ULU4 1186 aaPredicted RBP20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 TAF6LQ9Y6J9 622 aa20.42■□□□□ 0.86
SLC6A1-202ENST00000425938 DNAH12Q6ZR08 3092 aa20.41■□□□□ 0.86
SLC6A1-202ENST00000425938 CDC45O75419 566 aa20.41■□□□□ 0.86
SLC6A1-202ENST00000425938 ACVR2BQ13705 512 aa20.41■□□□□ 0.86
SLC6A1-202ENST00000425938 WTAPQ15007 396 aa20.41■□□□□ 0.86
SLC6A1-202ENST00000425938 CCDC144CPQ8IYA2 1237 aa20.41■□□□□ 0.86
SLC6A1-202ENST00000425938 CPVLQ9H3G5 476 aa20.41■□□□□ 0.86
SLC6A1-202ENST00000425938 SOWAHBA6NEL2 793 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 NFIBO00712 420 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 LCTP09848 1927 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 LRRC41Q15345 812 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 CDC37Q16543 378 aaPredicted RBP20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 TMEM67Q5HYA8 995 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 RNF180Q86T96 592 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 ADGRF4Q8IZF3 695 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 PCDH10Q9P2E7 1040 aa20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 ADD3Q9UEY8 706 aaKnown RBP20.4■□□□□ 0.86
SLC6A1-202ENST00000425938 BAZ2BQ9UIF8 2168 aaKnown RBP20.39■□□□□ 0.86
SLC6A1-202ENST00000425938 PTPDC1A2A3K4 754 aa20.39■□□□□ 0.85
SLC6A1-202ENST00000425938 BAATQ14032 418 aaPredicted RBP20.39■□□□□ 0.85
SLC6A1-202ENST00000425938 USH1GQ495M9 461 aa20.39■□□□□ 0.85
SLC6A1-202ENST00000425938 CHST3Q7LGC8 479 aa20.39■□□□□ 0.85
SLC6A1-202ENST00000425938 GDF15Q99988 308 aa20.39■□□□□ 0.85
SLC6A1-202ENST00000425938 SLC27A2O14975 620 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 PGK1P00558 417 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 SYN1P17600 705 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 BMP8BP34820 402 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 RNF20Q5VTR2 975 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 CREB3L3Q68CJ9 461 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 RNF207Q6ZRF8 634 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 CATIPQ7Z7H3 387 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 MB21D2Q8IYB1 491 aaPredicted RBP20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 CLEC4DQ8WXI8 215 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 VAT1LQ9HCJ6 419 aa20.38■□□□□ 0.85
SLC6A1-202ENST00000425938 ABCB11O95342 1321 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 KLRF2D3W0D1 207 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 DUSP11O75319 330 aaKnown RBP20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 CENPBP07199 599 aaPredicted RBP20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 CALML3P27482 149 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 MCM5P33992 734 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 ATN1P54259 1190 aaPredicted RBP20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 CCDC144BQ3MJ40 725 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 LENG1Q96BZ8 264 aaPredicted RBP20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 MTA3Q9BTC8 594 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 SPC25Q9HBM1 224 aa20.37■□□□□ 0.85
SLC6A1-202ENST00000425938 LOC102724159A0A0B4J2E5 919 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 ADCYAP1R1P41586 468 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 ANTXR2P58335 489 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 GRM4Q14833 912 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 NECTIN1Q15223 517 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 PWP2Q15269 919 aaKnown RBP20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 QRICH1Q2TAL8 776 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 SLC30A10Q6XR72 485 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 FBXO11Q86XK2 927 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 STAG2Q8N3U4 1231 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 JMJD4Q9H9V9 463 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 MAD2L2Q9UI95 211 aa20.36■□□□□ 0.85
SLC6A1-202ENST00000425938 ASTN1O14525 1302 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 SYNRGQ9UMZ2 1314 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 PALM3A6NDB9 673 aaPredicted RBP20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 PRC1O43663 620 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 MAGEA10P43363 369 aaPredicted RBP20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 ALDH5A1P51649 535 aaPredicted RBP20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 RPS6P62753 249 aaKnown RBP20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 RGS22Q8NE09 1264 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 IGDCC4Q8TDY8 1250 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 PURBQ96QR8 312 aaKnown RBP20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 MAF1Q9H063 256 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 KATNBL1Q9H079 304 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 SENP2Q9HC62 589 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 PHF24Q9UPV7 400 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 LRRC37A2A6NM11 1700 aa20.35■□□□□ 0.85
SLC6A1-202ENST00000425938 B4DLN1 442 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 ADAMTS4O75173 837 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 MRPL12P52815 198 aaKnown RBP20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 TROAPQ12815 778 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 SLC39A5Q6ZMH5 540 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 NOL8Q76FK4 1167 aaKnown RBP20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 MCF2L2Q86YR7 1114 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 TMTC2Q8N394 836 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 FERMT2Q96AC1 680 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 TMEM87BQ96K49 555 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 TSEN34Q9BSV6 310 aaKnown RBP20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 AMNQ9BXJ7 453 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 MRPL11Q9Y3B7 192 aaKnown RBP20.34■□□□□ 0.85
SLC6A1-202ENST00000425938 C6orf222P0C671 652 aaPredicted RBP20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 RTP1P59025 263 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 TNFAIP2Q03169 654 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 TRAF1Q13077 416 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 ERICH6BQ5W0A0 696 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 NFXL1Q6ZNB6 911 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms