RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ANKRD13CQ8N6S4 541 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 SLC44A5Q8NCS7 719 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 EHBP1Q8NDI1 1231 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 LRRC15Q8TF66 581 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 P2RX5Q93086 422 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 DEF6Q9H4E7 631 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 MMRN2Q9H8L6 949 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 SLC39A2Q9NP94 309 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 IL17RBQ9NRM6 502 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 FAM207AQ9NSI2 230 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF652Q9Y2D9 606 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 RHOBTB3O94955 611 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 SYF2O95926 243 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 TSPY3P0CV98 308 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 TSPY8P0CW00 308 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 MYBL2P10244 700 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 GGCXP38435 758 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 TECP42680 631 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 ZBED6P86452 979 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 PAPD7Q5XG87 772 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 LRRC31Q6UY01 552 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 C2CD5Q86YS7 1000 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF444Q8N0Y2 327 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 SECISBP2LQ93073 1101 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 SLIT2O94813 1529 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 ECM29Q5VYK3 1845 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 MCM3P25205 808 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 CXCR5P32302 372 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 KCNB1Q14721 858 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 DHTKD1Q96HY7 919 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 KBTBD4Q9NVX7 518 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 ARPP21Q9UBL0 812 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 HPCAL4Q9UM19 191 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 COL1A1P02452 1464 aaPredicted RBP8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 MYH2Q9UKX2 1941 aa8.4□□□□□ -1.06
SMARCC1-202ENST00000425518 NUTM2BA6NNL0 878 aaPredicted RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 NUTM2EB1AL46 878 aaPredicted RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 CCNE1P24864 410 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 DNA2P51530 1060 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 NAPAP54920 295 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 NAP1L1P55209 391 aaKnown RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 RPS8P62241 208 aaKnown RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 ATP2B2Q01814 1243 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 EZH2Q15910 746 aaKnown RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 CCDC70Q6NSX1 233 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 COG1Q8WTW3 980 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 NUP58Q9BVL2 599 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 MLXIPQ9HAP2 919 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 SMARCAL1Q9NZC9 954 aa8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 SAP30BPQ9UHR5 308 aaKnown RBP8.4□□□□□ -1.07
SMARCC1-202ENST00000425518 CYTH3O43739 400 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 AKR1B10O60218 316 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 SLC7A5Q01650 507 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 DDB1Q16531 1140 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 CCNI2Q6ZMN8 369 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 SND1Q7KZF4 910 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 DYMQ7RTS9 669 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 SELENOOQ9BVL4 669 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 TRIM9Q9C026 710 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 BICDL2A1A5D9 508 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 EIF3CLB5ME19 914 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 USO1O60763 962 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 MOCS3O95396 460 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 TXKP42681 527 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 GNAQP50148 359 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 SLC35G1Q2M3R5 365 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 MSL3Q8N5Y2 521 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 NOC3LQ8WTT2 800 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 HDAC7Q8WUI4 952 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 EIF3CQ99613 913 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 CCSER1Q9C0I3 900 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 MAD2L2Q9UI95 211 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 TACC1O75410 805 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 MEA1Q16626 185 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 DNAJC21Q5F1R6 531 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 DGKHQ86XP1 1220 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 FAM114A1Q8IWE2 563 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 CCDC170Q8IYT3 715 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 IFIH1Q9BYX4 1025 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 TANGO6Q9C0B7 1094 aa8.39□□□□□ -1.07
SMARCC1-202ENST00000425518 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 TOGARAM1Q9Y4F4 1720 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 SMCO2A6NFE2 343 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 KLRF2D3W0D1 207 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 ZNF263O14978 683 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 OR52Z1P0C646 297 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 VAV2P52735 878 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 CCDC181Q5TID7 509 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 RRAGAQ7L523 313 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 TGFBRAP1Q8WUH2 860 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 LRRC1Q9BTT6 524 aa8.38□□□□□ -1.07
SMARCC1-202ENST00000425518 VIPAS39Q9H9C1 493 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms