RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CNTN2Q02246 1040 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CXCL17Q6UXB2 119 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 NSMFQ6X4W1 530 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 FAM133AQ8N9E0 248 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 VTA1Q9NP79 307 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 A1CFQ9NQ94 594 aaKnown RBP14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 TOMM22Q9NS69 142 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CCPG1Q9ULG6 757 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 MYADML2A6NDP7 307 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 RANBP6O60518 1105 aaKnown RBP14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 KPNA6O60684 536 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CHGBP05060 677 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PWP2Q15269 919 aaKnown RBP14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 OTOP2Q7RTS6 562 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 AGBL1Q96MI9 1066 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 ASB2Q96Q27 587 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 RLFQ13129 1914 aa14.5□□□□□ -0.09
HLA-DQB3-203ENST00000425319 GRXCR1A8MXD5 290 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CD4P01730 458 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CCL23P55773 120 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CCDC85BQ15834 202 aaPredicted RBP14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CCDC96Q2M329 555 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 C16orf59Q7L2K0 433 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 EEPD1Q7L9B9 569 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 GNEQ9Y223 722 aaKnown RBP14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 FRMPD3Q5JV73 1810 aa14.49□□□□□ -0.09
HLA-DQB3-203ENST00000425319 NKRFO15226 690 aaKnown RBP eCLIP14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PBX2P40425 430 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 SKIV2LQ15477 1246 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 RASIP1Q5U651 963 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PPP2R2DQ66LE6 453 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 KCTD1Q719H9 257 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 SLC43A3Q8NBI5 491 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 DCAF4Q8WV16 495 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 NKX2-4Q9H2Z4 354 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CYP39A1Q9NYL5 469 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PRR12Q9ULL5 1215 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 NOD1Q9Y239 953 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PCDHA11Q9Y5I1 949 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 A0A0G2JMZ2 1700 aa14.48□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PTPDC1A2A3K4 754 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 SOWAHBA6NEL2 793 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 M0R2C6 588 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 ICAM1P05362 532 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 MYL3P08590 195 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 SMPD1P17405 629 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 RFC2P35250 354 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PDE4DQ08499 809 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CHMP4CQ96CF2 233 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 EPB41L4AQ9HCS5 686 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQB3-203ENST00000425319 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 ATP2A2P16615 1042 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 BFSP2Q13515 415 aa14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 DUSP28Q4G0W2 176 aa14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 FAM47CQ5HY64 1035 aa14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CCDC155Q8N6L0 562 aa14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 MTG1Q9BT17 334 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 FTOQ9C0B1 505 aaKnown RBP eCLIP14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 TRPV6Q9H1D0 765 aa14.46□□□□□ -0.09
HLA-DQB3-203ENST00000425319 LTBP2Q14767 1821 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ADCY6O43306 1168 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 B4GALT4O60513 344 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 COL9A1P20849 921 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 IRX5P78411 483 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 BAATQ14032 418 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MICALL1Q8N3F8 863 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 OR6J1Q8NGC5 347 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PHOSPHO2Q8TCD6 241 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ADAMTS19Q8TE59 1207 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 FGD4Q96M96 766 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TTC14Q96N46 770 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 KATNBL1Q9H079 304 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 ALDH8A1Q9H2A2 487 aaPredicted RBP14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PLIN4Q96Q06 1357 aa14.45□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CTAGE5O15320 804 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TOP1P11387 765 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 MFAP1P55081 439 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PTPN11Q06124 597 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PPP2R5BQ15173 497 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 CCDC178Q5BJE1 867 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 RRP12Q5JTH9 1297 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 SYDE2Q5VT97 1194 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TAPT1Q6NXT6 567 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 RNF207Q6ZRF8 634 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 TICAM2Q86XR7 235 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 FBXO16Q8IX29 292 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 USP38Q8NB14 1042 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 EVI5LQ96CN4 794 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 PDGFCQ9NRA1 345 aa14.44□□□□□ -0.1
HLA-DQB3-203ENST00000425319 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms