RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 IFNAR1P17181 557 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 GRB14Q14449 540 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 KCTD2Q14681 263 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 USP6NLQ92738 828 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 ZSCAN31Q96LW9 406 aaPredicted RBP23.86■■□□□ 1.41
PMS1-211ENST00000424766 MMP19Q99542 508 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 MAF1Q9H063 256 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 HOMER2Q9NSB8 354 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 GABRQQ9UN88 632 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 PTPN22Q9Y2R2 807 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 MRPL11Q9Y3B7 192 aaKnown RBP23.86■■□□□ 1.41
PMS1-211ENST00000424766 ZNF236Q9UL36 1845 aa23.86■■□□□ 1.41
PMS1-211ENST00000424766 CNTNAP5Q8WYK1 1306 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 PPP1R11O60927 126 aaPredicted RBP23.85■■□□□ 1.41
PMS1-211ENST00000424766 FLT3LGP49771 235 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 PRKCZQ05513 592 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 IRF5Q13568 498 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 ME3Q16798 604 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 USH1GQ495M9 461 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 MUM1L1Q5H9M0 696 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 CPLX2Q6PUV4 134 aaKnown RBP23.85■■□□□ 1.41
PMS1-211ENST00000424766 NOL8Q76FK4 1167 aaKnown RBP23.85■■□□□ 1.41
PMS1-211ENST00000424766 PCDHA1Q9Y5I3 950 aa23.85■■□□□ 1.41
PMS1-211ENST00000424766 V9GY48 417 aaPredicted RBP23.85■■□□□ 1.41
PMS1-211ENST00000424766 CPLX1O14810 134 aa23.84■■□□□ 1.41
PMS1-211ENST00000424766 SCRN1Q12765 414 aa23.84■■□□□ 1.41
PMS1-211ENST00000424766 MAP2K5Q13163 448 aa23.84■■□□□ 1.41
PMS1-211ENST00000424766 RGS22Q8NE09 1264 aa23.84■■□□□ 1.41
PMS1-211ENST00000424766 CLEC4DQ8WXI8 215 aa23.84■■□□□ 1.41
PMS1-211ENST00000424766 PIBF1Q8WXW3 757 aa23.84■■□□□ 1.41
PMS1-211ENST00000424766 RBM27Q9P2N5 1060 aaKnown RBP23.84■■□□□ 1.41
PMS1-211ENST00000424766 PRPF3O43395 683 aaKnown RBP23.83■■□□□ 1.41
PMS1-211ENST00000424766 HOXC6P09630 235 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 XRCC5P13010 732 aaKnown RBP23.83■■□□□ 1.41
PMS1-211ENST00000424766 ADORA2AP29274 412 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 RGS2P41220 211 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 MCM2P49736 904 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 FBXO46Q6PJ61 603 aaPredicted RBP23.83■■□□□ 1.41
PMS1-211ENST00000424766 ANKRD35Q8N283 1001 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 DDX11Q96FC9 970 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 SLC5A4Q9NY91 659 aa23.83■■□□□ 1.41
PMS1-211ENST00000424766 PLXNA1Q9UIW2 1896 aa23.83■■□□□ 1.4
PMS1-211ENST00000424766 TAL1P17542 331 aaPredicted RBP23.82■■□□□ 1.4
PMS1-211ENST00000424766 DPP9Q86TI2 863 aa23.82■■□□□ 1.4
PMS1-211ENST00000424766 RAET1EQ8TD07 263 aa23.82■■□□□ 1.4
PMS1-211ENST00000424766 RNF26Q9BY78 433 aaPredicted RBP23.82■■□□□ 1.4
PMS1-211ENST00000424766 SH2B1Q9NRF2 756 aaPredicted RBP23.82■■□□□ 1.4
PMS1-211ENST00000424766 PFASO15067 1338 aa23.82■■□□□ 1.4
PMS1-211ENST00000424766 DNAJC25-GNG10A0A024R161 153 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 hCG_1642624A0A1W2PR95 340 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 COBLO75128 1261 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 LARGE1O95461 756 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 AKAP17AQ02040 695 aaKnown RBP23.81■■□□□ 1.4
PMS1-211ENST00000424766 MCF2L2Q86YR7 1114 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 SAMD3Q8N6K7 520 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 GTF3C6Q969F1 213 aa23.81■■□□□ 1.4
PMS1-211ENST00000424766 A1CFQ9NQ94 594 aaKnown RBP23.81■■□□□ 1.4
PMS1-211ENST00000424766 DIS3Q9Y2L1 958 aaKnown RBP23.81■■□□□ 1.4
PMS1-211ENST00000424766 NFIBO00712 420 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 CDKL5O76039 1030 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 CYP2B6P20813 491 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 SSRP1Q08945 709 aaKnown RBP23.8■■□□□ 1.4
PMS1-211ENST00000424766 NSMFQ6X4W1 530 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 TRMT44Q8IYL2 757 aaKnown RBP23.8■■□□□ 1.4
PMS1-211ENST00000424766 TRIM22Q8IYM9 498 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 NECAB1Q8N987 351 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 PXYLP1Q8TE99 480 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 PHKBQ93100 1093 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 APBA2Q99767 749 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 CYP39A1Q9NYL5 469 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 PTCH2Q9Y6C5 1203 aa23.8■■□□□ 1.4
PMS1-211ENST00000424766 hCG_1984214I3L0E3 225 aa23.79■■□□□ 1.4
PMS1-211ENST00000424766 ZNF792Q3KQV3 632 aa23.79■■□□□ 1.4
PMS1-211ENST00000424766 ZNF713Q8N859 430 aaPredicted RBP23.79■■□□□ 1.4
PMS1-211ENST00000424766 SLC26A6Q9BXS9 759 aa23.79■■□□□ 1.4
PMS1-211ENST00000424766 MAP3K20Q9NYL2 800 aaKnown RBP23.79■■□□□ 1.4
PMS1-211ENST00000424766 RBBP6Q7Z6E9 1792 aaKnown RBP23.78■■□□□ 1.4
PMS1-211ENST00000424766 ADCY3O60266 1144 aa23.78■■□□□ 1.4
PMS1-211ENST00000424766 PKN1Q16512 942 aa23.78■■□□□ 1.4
PMS1-211ENST00000424766 PFKFB3Q16875 520 aaPredicted RBP23.78■■□□□ 1.4
PMS1-211ENST00000424766 RNF207Q6ZRF8 634 aa23.78■■□□□ 1.4
PMS1-211ENST00000424766 NPLOC4Q8TAT6 608 aa23.78■■□□□ 1.4
PMS1-211ENST00000424766 PTPDC1A2A3K4 754 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 POTEB2H3BUK9 544 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 OPLAHO14841 1288 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 PGK2P07205 417 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 SCG2P13521 617 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 GHRHRQ02643 423 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 BAATQ14032 418 aaPredicted RBP23.77■■□□□ 1.4
PMS1-211ENST00000424766 COL13A1Q5TAT6 717 aaPredicted RBP23.77■■□□□ 1.4
PMS1-211ENST00000424766 HEATR3Q7Z4Q2 680 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 SLAIN1Q8ND83 568 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 MCOLN1Q9GZU1 580 aa23.77■■□□□ 1.4
PMS1-211ENST00000424766 CD2BP2O95400 341 aaKnown RBP23.76■■□□□ 1.39
PMS1-211ENST00000424766 DEXIO95424 95 aa23.76■■□□□ 1.39
PMS1-211ENST00000424766 CTDNEP1O95476 244 aa23.76■■□□□ 1.39
PMS1-211ENST00000424766 GRK4P32298 578 aa23.76■■□□□ 1.39
PMS1-211ENST00000424766 WWC2Q6AWC2 1192 aa23.76■■□□□ 1.39
PMS1-211ENST00000424766 FAM133AQ8N9E0 248 aa23.76■■□□□ 1.39
PMS1-211ENST00000424766 TBC1D5Q92609 795 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms