RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ARNT2Q9HBZ2 717 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 MAP3K20Q9NYL2 800 aaKnown RBP4.67□□□□□ -1.66
SF3B1-205ENST00000424674 PCDHA11Q9Y5I1 949 aa4.67□□□□□ -1.66
SF3B1-205ENST00000424674 ALG1L2C9J202 215 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 TSPAN6O43657 245 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 DNAJA2O60884 412 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 LRRN2O75325 713 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 ZRANB2O95218 330 aaKnown RBP eCLIP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 ZGLP1P0C6A0 271 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 PMLP29590 882 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 RAB33AQ14088 237 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 MLECQ14165 292 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 NFE2Q16621 373 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 CWF19L2Q2TBE0 894 aaKnown RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 SYCP2LQ5T4T6 812 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 SDR16C5Q8N3Y7 309 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 PDILTQ8N807 584 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 PDZD8Q8NEN9 1154 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 ZNF296Q8WUU4 475 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 TSR2Q969E8 191 aaKnown RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 SYTL4Q96C24 671 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 EPB41L4BQ9H329 900 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 ZHX3Q9H4I2 956 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 ADAMTS1Q9UHI8 967 aa4.66□□□□□ -1.66
SF3B1-205ENST00000424674 R3HCC1Q9Y3T6 440 aaKnown RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 SUPT16HQ9Y5B9 1047 aaKnown RBP4.66□□□□□ -1.66
SF3B1-205ENST00000424674 ESYT3A0FGR9 886 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 EPB41L2O43491 1005 aaKnown RBP4.65□□□□□ -1.67
SF3B1-205ENST00000424674 GBP1P32455 592 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 EIF4A3P38919 411 aaKnown RBP4.65□□□□□ -1.67
SF3B1-205ENST00000424674 IFRD2Q12894 506 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-205ENST00000424674 BRDTQ58F21 947 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-205ENST00000424674 SPOCD1Q6ZMY3 1216 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 OXR1Q8N573 874 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 SLC39A13Q96H72 371 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 TOX2Q96NM4 488 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 KIF2CQ99661 725 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 ARPC5LQ9BPX5 153 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 DCP1AQ9NPI6 582 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-205ENST00000424674 KCNQ5Q9NR82 932 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 TMEM260Q9NX78 707 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 UBP1Q9NZI7 540 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 ROBO2Q9HCK4 1378 aa4.65□□□□□ -1.67
SF3B1-205ENST00000424674 SHISA3A0PJX4 238 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 FITM1A5D6W6 292 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 NFIBO00712 420 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 TIMM44O43615 452 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 RAG1P15918 1043 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 CNGA1P29973 690 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 CRKP46108 304 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 RNF4P78317 190 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 CLEC16AQ2KHT3 1053 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 SEZ6Q53EL9 994 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 AXDND1Q5T1B0 1012 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-205ENST00000424674 ICE2Q659A1 982 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 CILP2Q8IUL8 1156 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 DRC7Q8IY82 874 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 LILRA2Q8N149 483 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 RNF32Q9H0A6 362 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 BRMS1Q9HCU9 246 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 NRBP1Q9UHY1 535 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 ATP8A1Q9Y2Q0 1164 aa4.64□□□□□ -1.67
SF3B1-205ENST00000424674 CCDC163A0A0D9SF12 145 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 FAM221BA6H8Z2 402 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 SLC22A31A6NKX4 558 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 RGS13O14921 159 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 TBX3O15119 743 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 KLF4O43474 513 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 GREM1O60565 184 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 ALDH1L1O75891 902 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 ATE1O95260 518 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 C1QTNF9P0C862 333 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 ATF3P18847 181 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 MCM4P33991 863 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 TRHRP34981 398 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-205ENST00000424674 TEKQ02763 1124 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 DUSP4Q13115 394 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 NMIQ13287 307 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-205ENST00000424674 NR0B2Q15466 257 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 TMEM95Q3KNT9 176 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 OVOS1Q6IE37 1185 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 ANKLE2Q86XL3 938 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 SYNPOQ8N3V7 929 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 TEX19Q8NA77 164 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 FBXO41Q8TF61 875 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 SRRTQ9BXP5 876 aaKnown RBP4.63□□□□□ -1.67
SF3B1-205ENST00000424674 CCDC113Q9H0I3 377 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 ASCC2Q9H1I8 757 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-205ENST00000424674 SLC6A17Q9H1V8 727 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 SP110Q9HB58 689 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 GMIPQ9P107 970 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 ZNF69Q9UC07 566 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 MCM8Q9UJA3 840 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 LZTS1Q9Y250 596 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 PLAAQ9Y263 795 aa4.63□□□□□ -1.67
SF3B1-205ENST00000424674 PCDHB14Q9Y5E9 798 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms