RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 UPF3BQ9BZI7 483 aaKnown RBP21.46■■□□□ 1.03
HDAC6-205ENST00000423941 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
HDAC6-205ENST00000423941 LCTP09848 1927 aa21.46■■□□□ 1.03
HDAC6-205ENST00000423941 RBBP6Q7Z6E9 1792 aaKnown RBP21.46■■□□□ 1.03
HDAC6-205ENST00000423941 PLEKHA8P1O95397 391 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 HMGCRP04035 888 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 RBM25P49756 843 aaKnown RBP21.45■■□□□ 1.02
HDAC6-205ENST00000423941 APOBRQ0VD83 1088 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 TMTC3Q6ZXV5 915 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 FGD4Q96M96 766 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 KIF2CQ99661 725 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 HOMER2Q9NSB8 354 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 SLC5A4Q9NY91 659 aa21.45■■□□□ 1.02
HDAC6-205ENST00000423941 PNMA6FA0A0J9YX94 578 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 TAL1P17542 331 aaPredicted RBP21.44■■□□□ 1.02
HDAC6-205ENST00000423941 SLC4A3P48751 1232 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 ZNF467Q7Z7K2 595 aaPredicted RBP21.44■■□□□ 1.02
HDAC6-205ENST00000423941 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 FBXO11Q86XK2 927 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 MAML3Q96JK9 1138 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 PIGSQ96S52 555 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 RBM28Q9NW13 759 aaKnown RBP21.44■■□□□ 1.02
HDAC6-205ENST00000423941 CYP39A1Q9NYL5 469 aa21.44■■□□□ 1.02
HDAC6-205ENST00000423941 NFIBO00712 420 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 INHAP05111 366 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 PGK2P07205 417 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 PDIA3P30101 505 aaKnown RBP21.43■■□□□ 1.02
HDAC6-205ENST00000423941 CDC27P30260 824 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 FGD1P98174 961 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 GHRHRQ02643 423 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 MAMDC4Q6UXC1 1216 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 RAB11FIP4Q86YS3 637 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 CCDC144CPQ8IYA2 1237 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 ANKRD35Q8N283 1001 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 AMNQ9BXJ7 453 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 PDRG1Q9NUG6 133 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 PFASO15067 1338 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 ABCB11O95342 1321 aa21.43■■□□□ 1.02
HDAC6-205ENST00000423941 OPLAHO14841 1288 aa21.42■■□□□ 1.02
HDAC6-205ENST00000423941 DHX16O60231 1041 aaKnown RBP21.42■■□□□ 1.02
HDAC6-205ENST00000423941 UBXN2AP68543 259 aa21.42■■□□□ 1.02
HDAC6-205ENST00000423941 TRIM32Q13049 653 aa21.42■■□□□ 1.02
HDAC6-205ENST00000423941 MTFR1Q15390 333 aa21.42■■□□□ 1.02
HDAC6-205ENST00000423941 RTN1Q16799 776 aa21.42■■□□□ 1.02
HDAC6-205ENST00000423941 MSL3Q8N5Y2 521 aaKnown RBP21.42■■□□□ 1.02
HDAC6-205ENST00000423941 ZNF274Q96GC6 653 aaPredicted RBP21.42■■□□□ 1.02
HDAC6-205ENST00000423941 CACNB2Q08289 660 aaPredicted RBP21.41■■□□□ 1.02
HDAC6-205ENST00000423941 TRAF1Q13077 416 aa21.41■■□□□ 1.02
HDAC6-205ENST00000423941 ASTN1O14525 1302 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 RPTORQ8N122 1335 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 GOLGA8AA7E2F4 631 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 GOLGA8BA8MQT2 603 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 ADD1P35611 737 aaKnown RBP21.4■■□□□ 1.02
HDAC6-205ENST00000423941 CNTN2Q02246 1040 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 BAATQ14032 418 aaPredicted RBP21.4■■□□□ 1.02
HDAC6-205ENST00000423941 USH1GQ495M9 461 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 CMTR1Q8N1G2 835 aaKnown RBP21.4■■□□□ 1.02
HDAC6-205ENST00000423941 RRP36Q96EU6 259 aaKnown RBP21.4■■□□□ 1.02
HDAC6-205ENST00000423941 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 C22orf23Q9BZE7 217 aa21.4■■□□□ 1.02
HDAC6-205ENST00000423941 PAK6Q9NQU5 681 aaPredicted RBP21.4■■□□□ 1.02
HDAC6-205ENST00000423941 MRPL11Q9Y3B7 192 aaKnown RBP21.4■■□□□ 1.02
HDAC6-205ENST00000423941 CNTNAP5Q8WYK1 1306 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 CCDC196A0A1B0GTZ2 297 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 SOWAHBA6NEL2 793 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 CCL5P13501 91 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.01
HDAC6-205ENST00000423941 NTRK3Q16288 839 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 MFSD14CQ5VZR4 134 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 SAMD3Q8N6K7 520 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 TBC1D5Q92609 795 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 TINF2Q9BSI4 451 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 MAP3K20Q9NYL2 800 aaKnown RBP21.39■■□□□ 1.01
HDAC6-205ENST00000423941 BIN2Q9UBW5 565 aaPredicted RBP21.39■■□□□ 1.01
HDAC6-205ENST00000423941 PCDHA1Q9Y5I3 950 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 MCM3APO60318 1980 aa21.39■■□□□ 1.01
HDAC6-205ENST00000423941 LOC102724159A0A0B4J2E5 919 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 POTEB2H3BUK9 544 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 CYP2C19P33261 490 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 RPS6P62753 249 aaKnown RBP21.38■■□□□ 1.01
HDAC6-205ENST00000423941 PWP2Q15269 919 aaKnown RBP21.38■■□□□ 1.01
HDAC6-205ENST00000423941 NSMFQ6X4W1 530 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 HOMER1Q86YM7 354 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 MORC4Q8TE76 937 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 UNC93B1Q9H1C4 597 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 NRBP1Q9UHY1 535 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 BRCA2P51587 3418 aa21.38■■□□□ 1.01
HDAC6-205ENST00000423941 SYNGAP1Q96PV0 1343 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 CCDC85CA6NKD9 419 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 GJB1P08034 283 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 CYBAP13498 195 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 PRKAR2AP13861 404 aaKnown RBP21.37■■□□□ 1.01
HDAC6-205ENST00000423941 HSD17B4P51659 736 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 AK2P54819 239 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 RNF207Q6ZRF8 634 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 MCF2L2Q86YR7 1114 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 CCDC82Q8N4S0 544 aa21.37■■□□□ 1.01
HDAC6-205ENST00000423941 TRPV1Q8NER1 839 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms