RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 MYH6P13533 1939 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 TOM1O60784 492 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 PLCG1P19174 1290 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 TM4SF1P30408 202 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 TXLNAP40222 546 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 COPB1P53618 953 aaKnown RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 PNKPQ96T60 521 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 THRAP3Q9Y2W1 955 aaKnown RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 PCDHAC2Q9Y5I4 1007 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 CHD4Q14839 1912 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 MFAP3LO75121 409 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 DDAH1O94760 285 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 CALM1P0DP23 149 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 CALM2P0DP24 149 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 CALM3P0DP25 149 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 PTPROQ16827 1216 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 NT5DC1Q5TFE4 455 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 ARPP21Q9UBL0 812 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 TTC26A0AVF1 554 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 POTEMA6NI47 508 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 KIF5CO60282 957 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
ERCC1-204ENST00000423698 ABCB6Q9NP58 842 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 MARCH6O60337 910 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
ERCC1-204ENST00000423698 MAGEA9P43362 315 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 TNNI2P48788 182 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-204ENST00000423698 PDE4DQ08499 809 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 TTC19Q6DKK2 380 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-204ENST00000423698 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-204ENST00000423698 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 PCDHA4Q9UN74 947 aa13.18□□□□□ -0.3
ERCC1-204ENST00000423698 TPM1P09493 284 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 ERCC5P28715 1186 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.33e-8■■■■■ 39.6
ERCC1-204ENST00000423698 CDK8P49336 464 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 STK4Q13043 487 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 TRMT1LQ7Z2T5 733 aaKnown RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 RASA1P20936 1047 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 MNAT1P51948 309 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 FBXW10Q5XX13 1052 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 KCTD1Q719H9 257 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 TBCKQ8TEA7 893 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 FAM207AQ9NSI2 230 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 PHLPP2Q6ZVD8 1323 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 TDP2O95551 362 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 APBA1Q02410 837 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 LRRC31Q6UY01 552 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
ERCC1-204ENST00000423698 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 ANKRD2Q9GZV1 360 aa13.17□□□□□ -0.3
ERCC1-204ENST00000423698 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
ERCC1-204ENST00000423698 ARID5AQ03989 594 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
ERCC1-204ENST00000423698 ABHD10Q9NUJ1 306 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 MRFAP1Q9Y605 127 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 CCP110O43303 1012 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 BAG3O95817 575 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
ERCC1-204ENST00000423698 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms