RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 DEFB103AP81534 67 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 COG2Q14746 738 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 PTPROQ16827 1216 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 ZNF792Q3KQV3 632 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 CCDC144BQ3MJ40 725 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 NOL8Q76FK4 1167 aaKnown RBP6.89□□□□□ -1.31
HDAC8-212ENST00000421523 MAPKAPK5Q8IW41 473 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 SLC43A3Q8NBI5 491 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 SH3RF3Q8TEJ3 882 aaPredicted RBP6.89□□□□□ -1.31
HDAC8-212ENST00000421523 XAGE2Q96GT9 111 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 KIAA1683Q9H0B3 1180 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 UPF3AQ9H1J1 476 aaKnown RBP6.89□□□□□ -1.31
HDAC8-212ENST00000421523 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
HDAC8-212ENST00000421523 SAP30BPQ9UHR5 308 aaKnown RBP6.89□□□□□ -1.31
HDAC8-212ENST00000421523 HDAC5Q9UQL6 1122 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 TANC1Q9C0D5 1861 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 MYO7AQ13402 2215 aa6.89□□□□□ -1.31
HDAC8-212ENST00000421523 TET1Q8NFU7 2136 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 PNMA6EA0A0J9YXQ4 647 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 CTAGE5O15320 804 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 SRGAP3O43295 1099 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 BCAR3O75815 825 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 GNAI3P08754 354 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 PTGS1P23219 599 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-212ENST00000421523 TFCP2Q12800 502 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 SMAD4Q13485 552 aaKnown RBP6.88□□□□□ -1.31
HDAC8-212ENST00000421523 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-212ENST00000421523 ATF7IPQ6VMQ6 1270 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 TMEM105Q8N8V8 129 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 ATG4CQ96DT6 458 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 RAD9AQ99638 391 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 ALDH8A1Q9H2A2 487 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-212ENST00000421523 NSUN3Q9H649 340 aaKnown RBP6.88□□□□□ -1.31
HDAC8-212ENST00000421523 GINM1Q9NU53 330 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 HOXC10Q9NYD6 342 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 DLL3Q9NYJ7 618 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 HMG20BQ9P0W2 317 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 CTNNA3Q9UI47 895 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 PALD1Q9ULE6 856 aa6.88□□□□□ -1.31
HDAC8-212ENST00000421523 TNKSO95271 1327 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 FLT1P17948 1338 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 TBX10O75333 385 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 FLOT1O75955 427 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 BAIAP3O94812 1187 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 RFC2P35250 354 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 FXR2P51116 673 aaKnown RBP eCLIP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 NUBP1P53384 320 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 EVX2Q03828 476 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 ACVR2BQ13705 512 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 FSCN1Q16658 493 aaKnown RBP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 SPTY2D1Q68D10 685 aaPredicted RBP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 PI16Q6UXB8 463 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 ERICH6Q7L0X2 663 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 ZBTB33Q86T24 672 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 MB21D1Q8N884 522 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 PPP1R13LQ8WUF5 828 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 TGFBRAP1Q8WUH2 860 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 NSUN4Q96CB9 384 aaKnown RBP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 DHX36Q9H2U1 1008 aaKnown RBP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 CD207Q9UJ71 328 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 AKAP2Q9Y2D5 859 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 SMG1Q96Q15 3661 aaKnown RBP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 MCM3APO60318 1980 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 FOCADQ5VW36 1801 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 LOC400499M0QZD8 3231 aa6.87□□□□□ -1.31
HDAC8-212ENST00000421523 DSPP15924 2871 aaKnown RBP6.87□□□□□ -1.31
HDAC8-212ENST00000421523 WDFY3Q8IZQ1 3526 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 CABYRO75952 493 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 GJB5O95377 273 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 ZIC2O95409 532 aaPredicted RBP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 GTF2F1P35269 517 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 MCAMP43121 646 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 GPM6BQ13491 265 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 MVPQ14764 893 aaKnown RBP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 TBC1D9Q6ZT07 1266 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 TLK2Q86UE8 772 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 METTL16Q86W50 562 aaKnown RBP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 SPICE1Q8N0Z3 855 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 SSH3Q8TE77 659 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 RPGRIP1Q96KN7 1286 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 RIPOR3Q96MK2 946 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 IGFLR1Q9H665 355 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
HDAC8-212ENST00000421523 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 AATFQ9NY61 560 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 DIS3Q9Y2L1 958 aaKnown RBP6.86□□□□□ -1.31
HDAC8-212ENST00000421523 ASTN1O14525 1302 aa6.85□□□□□ -1.31
HDAC8-212ENST00000421523 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.85□□□□□ -1.31
HDAC8-212ENST00000421523 LOC730098B7Z3J9 87 aa6.85□□□□□ -1.31
HDAC8-212ENST00000421523 IPO8O15397 1037 aaKnown RBP6.85□□□□□ -1.31
HDAC8-212ENST00000421523 LINC01565O15544 149 aa6.85□□□□□ -1.31
HDAC8-212ENST00000421523 MAP4K4O95819 1239 aaPredicted RBP6.85□□□□□ -1.31
HDAC8-212ENST00000421523 SLC25A27O95847 323 aa6.85□□□□□ -1.31
HDAC8-212ENST00000421523 LMNAP02545 664 aaKnown RBP6.85□□□□□ -1.31
HDAC8-212ENST00000421523 GNAI2P04899 355 aa6.85□□□□□ -1.31
HDAC8-212ENST00000421523 HLA-DOAP06340 250 aa6.85□□□□□ -1.31
HDAC8-212ENST00000421523 IQCF3P0C7M6 154 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms