RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 LETM2Q2VYF4 491 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 RILPL1Q5EBL4 403 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
CHRD-204ENST00000420973 SUGCTQ9HAC7 445 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 C21orf2O43822 256 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 TTC38Q5R3I4 469 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 SNAP25P60880 206 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 GNG11P61952 73 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 CRYMQ14894 314 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 E4F1Q66K89 784 aaPredicted RBP16.2■□□□□ 0.18
CHRD-204ENST00000420973 C2CD5Q86YS7 1000 aa16.2■□□□□ 0.18
CHRD-204ENST00000420973 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 SCG2P13521 617 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 CDK8P49336 464 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
CHRD-204ENST00000420973 TACO1Q9BSH4 297 aaKnown RBP16.19■□□□□ 0.18
CHRD-204ENST00000420973 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
CHRD-204ENST00000420973 PP2D1A8MPX8 630 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 EZRP15311 586 aaKnown RBP16.19■□□□□ 0.18
CHRD-204ENST00000420973 CEP85LQ5SZL2 805 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 RNF187Q5TA31 235 aaPredicted RBP16.19■□□□□ 0.18
CHRD-204ENST00000420973 TRMT1LQ7Z2T5 733 aaKnown RBP16.19■□□□□ 0.18
CHRD-204ENST00000420973 AFAP1L1Q8TED9 768 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 SAMM50Q9Y512 469 aa16.19■□□□□ 0.18
CHRD-204ENST00000420973 SOGA3Q5TF21 947 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 C12orf60Q5U649 245 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 TMTC3Q6ZXV5 915 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 ZKSCAN4Q969J2 545 aaPredicted RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 MYH3P11055 1940 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 SEMA3EO15041 775 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 CCDC93Q567U6 631 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 KLHL23Q8NBE8 558 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 SYMPKQ92797 1274 aaKnown RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 CEP95Q96GE4 821 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 BAG1Q99933 345 aaPredicted RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 PUF60Q9UHX1 559 aaKnown RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 MYH2Q9UKX2 1941 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 SNUPNO95149 360 aaKnown RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 KIF4AO95239 1232 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 ZYXQ15942 572 aaKnown RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 MFSD4BQ5TF39 518 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 CCDC181Q5TID7 509 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 ATL3Q6DD88 541 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 GOLGA1Q92805 767 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 COA7Q96BR5 231 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 RNF26Q9BY78 433 aaPredicted RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 FANCLQ9NW38 375 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
CHRD-204ENST00000420973 MCM8Q9UJA3 840 aa16.18■□□□□ 0.18
CHRD-204ENST00000420973 GSDMDP57764 484 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 RBM26Q5T8P6 1007 aaKnown RBP16.17■□□□□ 0.18
CHRD-204ENST00000420973 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
CHRD-204ENST00000420973 PPP1R12BO60237 982 aaPredicted RBP16.17■□□□□ 0.18
CHRD-204ENST00000420973 CUTAO60888 179 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 BBOX1O75936 387 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 UBASH3AP57075 661 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
CHRD-204ENST00000420973 HOOK1Q9UJC3 728 aaKnown RBP16.17■□□□□ 0.18
CHRD-204ENST00000420973 RANBP1P43487 201 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 NFIAQ12857 509 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 PTPAQ15257 358 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 PKN1Q16512 942 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 KCTD1Q719H9 257 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
CHRD-204ENST00000420973 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 POLD1P28340 1107 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 BCAS4Q8TDM0 211 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 MICAL1Q8TDZ2 1067 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.16■□□□□ 0.18
CHRD-204ENST00000420973 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 USP17L5A8MUK1 530 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 GDF11O95390 407 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 RHOXF2BP0C7M4 288 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 IQCB1Q15051 598 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 POSTNQ15063 836 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 METTL16Q86W50 562 aaKnown RBP16.16■□□□□ 0.18
CHRD-204ENST00000420973 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
CHRD-204ENST00000420973 SHISA4Q96DD7 197 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 SAAL1Q96ER3 474 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 RHOXF2Q9BQY4 288 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 WDR19Q8NEZ3 1342 aa16.16■□□□□ 0.18
CHRD-204ENST00000420973 PARP1P09874 1014 aaKnown RBP16.15■□□□□ 0.18
CHRD-204ENST00000420973 CALM1P0DP23 149 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 CALM2P0DP24 149 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 CALM3P0DP25 149 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 TNNI2P48788 182 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 KARSQ15046 597 aaKnown RBP16.15■□□□□ 0.18
CHRD-204ENST00000420973 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
CHRD-204ENST00000420973 TATDN2Q93075 761 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 PIGSQ96S52 555 aa16.15■□□□□ 0.18
CHRD-204ENST00000420973 DAGLAQ9Y4D2 1042 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms