RNA–Protein interactions for RNA: ENST00000420591.1

SNED1-206, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 3

Gene SNED1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-206ENST00000420591 TNFAIP2Q03169 654 aa23.33■■□□□ 1.33
SNED1-206ENST00000420591 BADQ92934 168 aa23.33■■□□□ 1.33
SNED1-206ENST00000420591 DSCC1Q9BVC3 393 aa23.33■■□□□ 1.33
SNED1-206ENST00000420591 CYP39A1Q9NYL5 469 aa23.33■■□□□ 1.33
SNED1-206ENST00000420591 CST5P28325 142 aaPredicted RBP23.32■■□□□ 1.32
SNED1-206ENST00000420591 GJA9P57773 515 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 ZNF543Q08ER8 600 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 GNASQ5JWF2 1037 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 SH3RF1Q7Z6J0 888 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 DGKHQ86XP1 1220 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 DEFB123Q8N688 67 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 ZKSCAN3Q9BRR0 538 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 TMEM39AQ9NV64 488 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 ADD3Q9UEY8 706 aaKnown RBP23.32■■□□□ 1.32
SNED1-206ENST00000420591 NEDD4P46934 1319 aa23.32■■□□□ 1.32
SNED1-206ENST00000420591 TRIM43BA6NCK2 446 aa23.31■■□□□ 1.32
SNED1-206ENST00000420591 ASGR1P07306 291 aa23.31■■□□□ 1.32
SNED1-206ENST00000420591 RAG1P15918 1043 aa23.31■■□□□ 1.32
SNED1-206ENST00000420591 GPATCH4Q5T3I0 446 aaKnown RBP23.31■■□□□ 1.32
SNED1-206ENST00000420591 TRIM43Q96BQ3 446 aaPredicted RBP23.31■■□□□ 1.32
SNED1-206ENST00000420591 UPF3AQ9H1J1 476 aaKnown RBP23.31■■□□□ 1.32
SNED1-206ENST00000420591 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
SNED1-206ENST00000420591 ELP1O95163 1332 aa23.31■■□□□ 1.32
SNED1-206ENST00000420591 PTPDC1A2A3K4 754 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 MYADML2A6NDP7 307 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 KDM4AO75164 1064 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 BAATQ14032 418 aaPredicted RBP23.3■■□□□ 1.32
SNED1-206ENST00000420591 CCSAPQ6IQ19 270 aaPredicted RBP23.3■■□□□ 1.32
SNED1-206ENST00000420591 TOX2Q96NM4 488 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 KATNBL1Q9H079 304 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 AP5M1Q9H0R1 490 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 MROH7Q68CQ1 1323 aa23.3■■□□□ 1.32
SNED1-206ENST00000420591 EEPD1Q7L9B9 569 aa23.29■■□□□ 1.32
SNED1-206ENST00000420591 ANKRD33Q7Z3H0 272 aa23.29■■□□□ 1.32
SNED1-206ENST00000420591 KRT23Q9C075 422 aa23.29■■□□□ 1.32
SNED1-206ENST00000420591 SZT2Q5T011 3432 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 B4E1Z4 1266 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 KIAA0355O15063 1070 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 ADCY6O43306 1168 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 ZEB2O60315 1214 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 NEFLP07196 543 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 SNHG28P0DPA3 235 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 PDE4AP27815 886 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 IQSEC1Q6DN90 963 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 PNMA1Q8ND90 353 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 MPHOSPH6Q99547 160 aaKnown RBP23.28■■□□□ 1.32
SNED1-206ENST00000420591 CNNM2Q9H8M5 875 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 VTA1Q9NP79 307 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 DNAH12Q6ZR08 3092 aa23.28■■□□□ 1.32
SNED1-206ENST00000420591 A0A0U1RQG5 324 aaPredicted RBP23.27■■□□□ 1.32
SNED1-206ENST00000420591 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.27■■□□□ 1.32
SNED1-206ENST00000420591 NFIBO00712 420 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 CALML3P27482 149 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 IRX5P78411 483 aaPredicted RBP23.27■■□□□ 1.32
SNED1-206ENST00000420591 SHHQ15465 462 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 Q7L0L9 218 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 TLK2Q86UE8 772 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 RUFY2Q8WXA3 655 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 ZSCAN10Q96SZ4 725 aaPredicted RBP23.27■■□□□ 1.32
SNED1-206ENST00000420591 UBAC1Q9BSL1 405 aa23.27■■□□□ 1.32
SNED1-206ENST00000420591 LAMA3Q16787 3333 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 TLR3O15455 904 aaKnown RBP23.26■■□□□ 1.31
SNED1-206ENST00000420591 DYNC1LI2O43237 492 aaPredicted RBP23.26■■□□□ 1.31
SNED1-206ENST00000420591 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
SNED1-206ENST00000420591 GOLGA8HP0CJ92 632 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 BEX3Q00994 111 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 FAAP100Q0VG06 881 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 TTC22Q5TAA0 569 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 RNF207Q6ZRF8 634 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 KIAA1211Q6ZU35 1233 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 FBXO16Q8IX29 292 aaPredicted RBP23.26■■□□□ 1.31
SNED1-206ENST00000420591 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
SNED1-206ENST00000420591 WDR19Q8NEZ3 1342 aa23.26■■□□□ 1.31
SNED1-206ENST00000420591 LOC102724159A0A0B4J2E5 919 aa23.25■■□□□ 1.31
SNED1-206ENST00000420591 ARVCFO00192 962 aa23.25■■□□□ 1.31
SNED1-206ENST00000420591 ALDH5A1P51649 535 aaPredicted RBP23.25■■□□□ 1.31
SNED1-206ENST00000420591 PWP2Q15269 919 aaKnown RBP23.25■■□□□ 1.31
SNED1-206ENST00000420591 FSCN1Q16658 493 aaKnown RBP23.25■■□□□ 1.31
SNED1-206ENST00000420591 UBA5Q9GZZ9 404 aa23.25■■□□□ 1.31
SNED1-206ENST00000420591 PDGFCQ9NRA1 345 aa23.25■■□□□ 1.31
SNED1-206ENST00000420591 ZSWIM5Q9P217 1185 aa23.25■■□□□ 1.31
SNED1-206ENST00000420591 GNEQ9Y223 722 aaKnown RBP23.25■■□□□ 1.31
SNED1-206ENST00000420591 DDX49Q9Y6V7 483 aaKnown RBP23.25■■□□□ 1.31
SNED1-206ENST00000420591 ASTN1O14525 1302 aa23.25■■□□□ 1.31
SNED1-206ENST00000420591 MCM3APO60318 1980 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 B4DLN1 442 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 DHX16O60231 1041 aaKnown RBP23.24■■□□□ 1.31
SNED1-206ENST00000420591 CABYRO75952 493 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 SMPD1P17405 629 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 MRPL12P52815 198 aaKnown RBP23.24■■□□□ 1.31
SNED1-206ENST00000420591 NKX3-2P78367 333 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 FPGSQ05932 587 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 TRDNQ13061 729 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 USH1GQ495M9 461 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 C9orf50Q5SZB4 431 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 TAPT1Q6NXT6 567 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 CLEC4DQ8WXI8 215 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 ANKS1AQ92625 1134 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 Q9Y3F1 56 aa23.24■■□□□ 1.31
SNED1-206ENST00000420591 ITGB8P26012 769 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms