RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ELOA2Q8IYF1 753 aaPredicted RBP16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 TUBGCP2Q9BSJ2 902 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 PLCB1Q9NQ66 1216 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 YWHAEP62258 255 aaKnown RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 LRRC63Q05C16 580 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 PPP1R2P3Q6NXS1 205 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 IFT81Q8WYA0 676 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 SHPRHQ149N8 1683 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 PPIP5K2O43314 1243 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 LSM14BQ9BX40 385 aaKnown RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 ZNF215Q9UL58 517 aaPredicted RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 STAMQ92783 540 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 PAGE5Q96GU1 130 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 RUNDC3BQ96NL0 473 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 WDR11Q9BZH6 1224 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 LARSQ9P2J5 1176 aaKnown RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 SALL3Q9BXA9 1300 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 SPOPO43791 374 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 PPP1R7Q15435 360 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 PAF1Q8N7H5 531 aa16.35■□□□□ 0.21
AP000550.1-201ENST00000420508 AP3B2Q13367 1082 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 FER1L4A9Z1Z3 1794 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 GOLGA6BA6NDN3 693 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 SLC26A4O43511 780 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 NPR1P16066 1061 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 GNPTABQ3T906 1256 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 MIER3Q7Z3K6 550 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 CFBP00751 764 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 FKBP3Q00688 224 aaKnown RBP16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 ZNF34Q8IZ26 560 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 NEDD4P46934 1319 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 U2AF2P26368 475 aaKnown RBP eCLIP16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 PDIA6Q15084 440 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 PEX26Q7Z412 305 aa16.34■□□□□ 0.21
AP000550.1-201ENST00000420508 CHMP2AO43633 222 aa16.33■□□□□ 0.21
AP000550.1-201ENST00000420508 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.21
AP000550.1-201ENST00000420508 ZBED6P86452 979 aa16.33■□□□□ 0.21
AP000550.1-201ENST00000420508 ALCAMQ13740 583 aa16.33■□□□□ 0.21
AP000550.1-201ENST00000420508 ZNF827Q17R98 1081 aa16.33■□□□□ 0.21
AP000550.1-201ENST00000420508 FAM207AQ9NSI2 230 aaPredicted RBP16.33■□□□□ 0.21
AP000550.1-201ENST00000420508 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 GSTA5Q7RTV2 222 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 ATRIPQ8WXE1 791 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 AMFRQ9UKV5 643 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 GOLGA6CA6NDK9 693 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 CCDC169A6NNP5 214 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 GOLGA6DP0CG33 693 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 NR5A1Q13285 461 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 LONRF3Q496Y0 759 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 CCDC121Q6ZUS5 278 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 GIMAP7Q8NHV1 300 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 GOLGA6AQ9NYA3 693 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 PCDHB6Q9Y5E3 794 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 SF3B3Q15393 1217 aaKnown RBP16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 C6orf163Q5TEZ5 329 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 TSNARE1Q96NA8 513 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 RSPH14Q9UHP6 348 aa16.33■□□□□ 0.2
AP000550.1-201ENST00000420508 NWD1Q149M9 1564 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 GRM4Q14833 912 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 CCDC50Q8IVM0 306 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 AOC3Q16853 763 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 IQCGQ9H095 443 aaKnown RBP16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 FERP16591 822 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 CASP14P31944 242 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 BIRC3Q13489 604 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 PLS1Q14651 629 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 USH1GQ495M9 461 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 CALR3Q96L12 384 aaKnown RBP16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 RIMS1Q86UR5 1692 aaKnown RBP16.32■□□□□ 0.2
AP000550.1-201ENST00000420508 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 GOLGA8KD6RF30 607 aa16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 RGL2O15211 777 aa16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 APBA3O96018 575 aa16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 PRR16Q569H4 304 aa16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 DTNBO60941 627 aa16.31■□□□□ 0.2
AP000550.1-201ENST00000420508 TBCKQ8TEA7 893 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms