RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 WDR19Q8NEZ3 1342 aa21.21■□□□□ 0.99
ECHDC3-202ENST00000420401 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 KLRF2D3W0D1 207 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 DHX16O60231 1041 aaKnown RBP21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 PGK2P07205 417 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 LIFRP42702 1097 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 TROAPQ12815 778 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 GRM4Q14833 912 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 MAP3K21Q5TCX8 1036 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 ADGRF4Q8IZF3 695 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 FLRT1Q9NZU1 646 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 ZNF236Q9UL36 1845 aa21.2■□□□□ 0.98
ECHDC3-202ENST00000420401 PALM3A6NDB9 673 aaPredicted RBP21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 DDAH1O94760 285 aa21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 CACNB2Q08289 660 aaPredicted RBP21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 ZNF792Q3KQV3 632 aa21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 MAML3Q96JK9 1138 aa21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 CPVLQ9H3G5 476 aa21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 MAD2L2Q9UI95 211 aa21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 PFASO15067 1338 aa21.19■□□□□ 0.98
ECHDC3-202ENST00000420401 EXOSC10Q01780 885 aaKnown RBP21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 ADCK5Q3MIX3 580 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 ZNF654Q8IZM8 581 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 STAG2Q8N3U4 1231 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 NUP133Q8WUM0 1156 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 MAP3K14Q99558 947 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 USP26Q9BXU7 913 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 VAT1LQ9HCJ6 419 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 GPHNQ9NQX3 736 aaPredicted RBP21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 SNX14Q9Y5W7 946 aa21.18■□□□□ 0.98
ECHDC3-202ENST00000420401 DNAJC25-GNG10A0A024R161 153 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 CALM1P0DP23 149 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 CALM2P0DP24 149 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 CALM3P0DP25 149 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 PSMA5P28066 241 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 KIF5BP33176 963 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 MDM2Q00987 491 aaPredicted RBP21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 CDC37Q16543 378 aaPredicted RBP21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 CTCFLQ8NI51 663 aaPredicted RBP21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 JAKMIP1Q96N16 626 aaKnown RBP21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 LRRC2Q9BYS8 371 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 JMJD4Q9H9V9 463 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 SLC12A7Q9Y666 1083 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 UNC80Q8N2C7 3258 aa21.17■□□□□ 0.98
ECHDC3-202ENST00000420401 IGHA2P01877 340 aa21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 CYP2C19P33261 490 aa21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 COL9A3Q14050 684 aaPredicted RBP21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 SYNE3Q6ZMZ3 975 aa21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 SGMS1Q86VZ5 419 aa21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 MSL3Q8N5Y2 521 aaKnown RBP21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 TINF2Q9BSI4 451 aa21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 COL25A1Q9BXS0 654 aaPredicted RBP21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 A1CFQ9NQ94 594 aaKnown RBP21.16■□□□□ 0.98
ECHDC3-202ENST00000420401 POTEB2H3BUK9 544 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 FGD1P98174 961 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 LRRC26Q2I0M4 334 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 MUM1L1Q5H9M0 696 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 BLOC1S2Q6QNY1 142 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 ZNF467Q7Z7K2 595 aaPredicted RBP21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 LBHD1Q9BQE6 289 aaPredicted RBP21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 LZTS2Q9BRK4 669 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 FRMPD3Q5JV73 1810 aa21.15■□□□□ 0.98
ECHDC3-202ENST00000420401 COL6A1P12109 1028 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 CCND3P30281 292 aaPredicted RBP21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 GNAQP50148 359 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 QRICH1Q2TAL8 776 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 USH1GQ495M9 461 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 NSMFQ6X4W1 530 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 FBXO11Q86XK2 927 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 MYL10Q9BUA6 226 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 CYP39A1Q9NYL5 469 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 NRBP1Q9UHY1 535 aa21.14■□□□□ 0.97
ECHDC3-202ENST00000420401 ABCB11O95342 1321 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 TAL1P17542 331 aaPredicted RBP21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 CNGA1P29973 690 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 TRAF1Q13077 416 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 LHX8Q68G74 356 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 TCEANC2Q96MN5 208 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 AMNQ9BXJ7 453 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 RIOX1Q9H6W3 641 aa21.13■□□□□ 0.97
ECHDC3-202ENST00000420401 SYNGAP1Q96PV0 1343 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 ZBTB5O15062 677 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 SMARCA1P28370 1054 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 MAMDC4Q6UXC1 1216 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 FAM133AQ8N9E0 248 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 RGS22Q8NE09 1264 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 CLEC4DQ8WXI8 215 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 MTMR8Q96EF0 704 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 MAF1Q9H063 256 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 CNPY2Q9Y2B0 182 aa21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 MRPL11Q9Y3B7 192 aaKnown RBP21.12■□□□□ 0.97
ECHDC3-202ENST00000420401 PTPDC1A2A3K4 754 aa21.11■□□□□ 0.97
ECHDC3-202ENST00000420401 NFIBO00712 420 aa21.11■□□□□ 0.97
ECHDC3-202ENST00000420401 MSCO60682 206 aa21.11■□□□□ 0.97
ECHDC3-202ENST00000420401 CYBAP13498 195 aa21.11■□□□□ 0.97
ECHDC3-202ENST00000420401 CASTP20810 708 aaKnown RBP21.11■□□□□ 0.97
ECHDC3-202ENST00000420401 RPS6KB1P23443 525 aa21.11■□□□□ 0.97
ECHDC3-202ENST00000420401 RNF207Q6ZRF8 634 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms