RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 LIFRP42702 1097 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 PAFAH1B1P43034 410 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 CDK17Q00537 523 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ACCSLQ4AC99 568 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ZNF658Q5TYW1 1059 aaPredicted RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NFRKBQ6P4R8 1299 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SMCR8Q8TEV9 937 aaPredicted RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SEC16BQ96JE7 1060 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 RBM12Q9NTZ6 932 aaKnown RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 AGPAT5Q9NUQ2 364 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SLC12A6Q9UHW9 1150 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 MYH6P13533 1939 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NRAPQ86VF7 1730 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 TRIM75PA6NK02 468 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ZNF263O14978 683 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 GHRP10912 638 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 EEF1GP26641 437 aaKnown RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 FOXO4P98177 505 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 QPCTQ16769 361 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ARMC9Q7Z3E5 817 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ABTB2Q8N961 1025 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 STAMQ92783 540 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 FERMT2Q96AC1 680 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SPDL1Q96EA4 605 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 TMBIM4Q9HC24 238 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NOD2Q9HC29 1040 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 CABP5Q9NP86 173 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SMARCAL1Q9NZC9 954 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 LRWD1Q9UFC0 647 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 RIPOR2Q9Y4F9 1068 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 USO1O60763 962 aaKnown RBP8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 ELF3P78545 371 aaPredicted RBP8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 ZBED6P86452 979 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 BYSLQ13895 437 aaKnown RBP8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 TMEM67Q5HYA8 995 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 AP1ARQ63HQ0 302 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CRELD2Q6UXH1 353 aaPredicted RBP8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 LRP10Q7Z4F1 713 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CACNA2D3Q8IZS8 1091 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 WHAMMQ8TF30 809 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 LMBR1Q8WVP7 490 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CUL5Q93034 780 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 NUP58Q9BVL2 599 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 EHD2Q9NZN4 543 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 AXIN2Q9Y2T1 843 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 SLC12A7Q9Y666 1083 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CHD4Q14839 1912 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CXCR5P32302 372 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 HPDP32754 393 aaPredicted RBP8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 DNM2P50570 870 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CCDC96Q2M329 555 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 NSMCE1Q8WV22 266 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 CCT6BQ92526 530 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 BLZF1Q9H2G9 400 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 LRP6O75581 1613 aa8.9□□□□□ -0.98
HMGXB4-202ENST00000418170 DISP2A7MBM2 1401 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 EME2A4GXA9 379 aaPredicted RBP8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 EYA2O00167 538 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 IRF6O14896 467 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 SRGNP10124 158 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 SPA17Q15506 151 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 CDC37Q16543 378 aaPredicted RBP8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 KIF9Q9HAQ2 790 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 EPB41L5Q9HCM4 733 aa8.9□□□□□ -0.99
HMGXB4-202ENST00000418170 GOLGA6L10A6NI86 522 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 BUB1BO60566 1050 aaPredicted RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 HEXIM1O94992 359 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 DEXIO95424 95 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 TRIM21P19474 475 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC155Q8N6L0 562 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 HVCN1Q96D96 273 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ALS2CR12Q96Q35 445 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 MLXIPQ9HAP2 919 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 HOMER3Q9NSC5 361 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ETAA1Q9NY74 926 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ITGB4P16144 1822 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 RASSF10A6NK89 507 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PTCD1O75127 700 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 MOCS3O95396 460 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PAEPP09466 180 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PRCPP42785 496 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 GUCY2DQ02846 1103 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 LRRC24Q50LG9 513 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 MSL1Q68DK7 614 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PDXDC2PQ6P474 469 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 IFT81Q8WYA0 676 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 STAMBPL1Q96FJ0 436 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 PSMB7Q99436 277 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 MTRQ99707 1265 aa8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 IFIH1Q9BYX4 1025 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-202ENST00000418170 RMND1Q9NWS8 449 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms