RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CYLC1P35663 651 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 EIF4A3P38919 411 aaKnown RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 MAGEA1P43355 309 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 SARSP49591 514 aaKnown RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 SEC23AQ15436 765 aa14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 BEND6Q5SZJ8 279 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF8-203ENST00000417814 NPHP3-ACAD11A0A0J9YXS1 232 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 GTF2A1P52655 376 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 NFIXQ14938 502 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 RDH13Q8NBN7 331 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 PANX2Q96RD6 677 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 ACBD3Q9H3P7 528 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 RFX7Q2KHR2 1363 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 ABCC12Q96J65 1359 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 DCAF17Q5H9S7 520 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 CALML4Q96GE6 196 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 DISC1Q9NRI5 854 aa14.71□□□□□ -0.05
TNFRSF8-203ENST00000417814 SFI1A8K8P3 1242 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 CYP4A11Q02928 519 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 EHHADHQ08426 723 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 ZNF658Q5TYW1 1059 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 TEX11Q8IYF3 940 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 SNX29Q8TEQ0 813 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 LRRC1Q9BTT6 524 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 ZNF652Q9Y2D9 606 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 SLIT1O75093 1534 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 PDE2AO00408 941 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 TDP2O95551 362 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 KCTD1Q719H9 257 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 RSRC2Q7L4I2 434 aaKnown RBP14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 DMGDHQ9UI17 866 aaKnown RBP14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 EPHB6O15197 1021 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 TRIML1Q8N9V2 468 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 AFAP1L1Q8TED9 768 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 RMND1Q9NWS8 449 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 CACNA1FO60840 1977 aa14.7□□□□□ -0.06
TNFRSF8-203ENST00000417814 SPAG1Q07617 926 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 BRD3Q15059 726 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 USH1GQ495M9 461 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 RIOK1Q9BRS2 568 aaKnown RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 NALCNQ8IZF0 1738 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 GOLGA6CA6NDK9 693 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 CHMP2AO43633 222 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 GOLGA6DP0CG33 693 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 ACTN2P35609 894 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 POLR2FP61218 127 aaKnown RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 UBXN2AP68543 259 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 NGLY1Q96IV0 654 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 EYA3Q99504 573 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 GOLGA6AQ9NYA3 693 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 GOLGA6BA6NDN3 693 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 USP17L5A8MUK1 530 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 USO1O60763 962 aaKnown RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 ATP2C1P98194 919 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 NSUN4Q96CB9 384 aaKnown RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 CCDC113Q9H0I3 377 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 RBM28Q9NW13 759 aaKnown RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 REXO2Q9Y3B8 237 aaKnown RBP14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 CAPN6Q9Y6Q1 641 aa14.69□□□□□ -0.06
TNFRSF8-203ENST00000417814 USP8P40818 1118 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 PAFAH1B1P43034 410 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 INTS5Q6P9B9 1019 aaKnown RBP14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 TMEM47Q9BQJ4 181 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 GOPCQ9HD26 462 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 CNTNAP5Q8WYK1 1306 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 TULP2O00295 520 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 UFL1O94874 794 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 CALM1P0DP23 149 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 CALM2P0DP24 149 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 CALM3P0DP25 149 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 SLC20A2Q08357 652 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 PDCLQ13371 301 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 NUDT12Q9BQG2 462 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 CHORDC1Q9UHD1 332 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 RWDD2AQ9UIY3 292 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 RGPD5Q99666 1765 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 ARHGAP25P42331 645 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 HERVK_113P62684 666 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 GUCY2DQ02846 1103 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 ALX1Q15699 326 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 HERC4Q5GLZ8 1057 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 ZNF622Q969S3 477 aaKnown RBP eCLIP14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 ADAMTS1Q9UHI8 967 aa14.68□□□□□ -0.06
TNFRSF8-203ENST00000417814 TLDC2A0PJX2 215 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 TACC1O75410 805 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 KRT14P02533 472 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 TRADDQ15628 312 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 TTBK2Q6IQ55 1244 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 FCHSD1Q86WN1 690 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 BCAS4Q8TDM0 211 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 CAMTA2O94983 1202 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 CALML3P27482 149 aa14.67□□□□□ -0.06
TNFRSF8-203ENST00000417814 GNGT1P63211 74 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms