RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 ABCB11O95342 1321 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 GOLGA8AA7E2F4 631 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 GOLGA8BA8MQT2 603 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 COBLO75128 1261 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 PLEKHA8P1O95397 391 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 DPP9Q86TI2 863 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 CLEC4DQ8WXI8 215 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 PIGSQ96S52 555 aa20.33■□□□□ 0.85
COMMD3-BMI1-201ENST00000417470 CDC27P30260 824 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 FUT2Q10981 343 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ZNF792Q3KQV3 632 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 SLC9C1Q4G0N8 1177 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MUM1L1Q5H9M0 696 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 OLFML2BQ68BL8 750 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 RAB11FIP4Q86YS3 637 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 CCDC144CPQ8IYA2 1237 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ANKRD35Q8N283 1001 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 RRP36Q96EU6 259 aaKnown RBP20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 DDX11Q96FC9 970 aa20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 A1CFQ9NQ94 594 aaKnown RBP20.32■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 PFASO15067 1338 aa20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 NEK4P51957 841 aa20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ZNF467Q7Z7K2 595 aaPredicted RBP20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 SAMD3Q8N6K7 520 aa20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 NPLOC4Q8TAT6 608 aa20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 TBC1D32Q96NH3 1257 aa20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 HOMER2Q9NSB8 354 aa20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MRPL11Q9Y3B7 192 aaKnown RBP20.31■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 HMGCRP04035 888 aa20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 GHRHRQ02643 423 aa20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MSL3Q8N5Y2 521 aaKnown RBP20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 TRIB2Q92519 343 aa20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ABHD8Q96I13 439 aa20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ZNF333Q96JL9 665 aa20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MAP3K20Q9NYL2 800 aaKnown RBP20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 CYP39A1Q9NYL5 469 aa20.3■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 AK2P54819 239 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 NTRK3Q16288 839 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 USH1GQ495M9 461 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 HOMER1Q86YM7 354 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MCF2L2Q86YR7 1114 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 FAM133AQ8N9E0 248 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MAML3Q96JK9 1138 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 SEC63Q9UGP8 760 aaKnown RBP20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 PCDHA1Q9Y5I3 950 aa20.29■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 CNTNAP5Q8WYK1 1306 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ZNFX1Q9P2E3 1918 aaKnown RBP20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 SMCHD1A6NHR9 2005 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 LOC102724159A0A0B4J2E5 919 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 NFIBO00712 420 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 PGK2P07205 417 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 ELNP15502 786 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 UBXN2AP68543 259 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 PWP2Q15269 919 aaKnown RBP20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MAMDC4Q6UXC1 1216 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 CMTR1Q8N1G2 835 aaKnown RBP20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 SH3TC2Q8TF17 1288 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 FLRT1Q9NZU1 646 aa20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 IFNAR1P17181 557 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 TAL1P17542 331 aaPredicted RBP20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 RABEP1Q15276 862 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 CCL14Q16627 93 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 MFSD14CQ5VZR4 134 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 TPCN1Q9ULQ1 816 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 CENPFP49454 3210 aa20.27■□□□□ 0.84
COMMD3-BMI1-201ENST00000417470 hCG_1984214I3L0E3 225 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PFKFB2O60825 505 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 INHAP05111 366 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 RPS6P62753 249 aaKnown RBP20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 BAATQ14032 418 aaPredicted RBP20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 NSMFQ6X4W1 530 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 RNF207Q6ZRF8 634 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 TEX2Q8IWB9 1127 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CCDC82Q8N4S0 544 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 ZNF713Q8N859 430 aaPredicted RBP20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 FGD4Q96M96 766 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 TINF2Q9BSI4 451 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 OPLAHO14841 1288 aa20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CCT2P78371 535 aaKnown RBP20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 RNF26Q9BY78 433 aaPredicted RBP20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 BIN2Q9UBW5 565 aaPredicted RBP20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 V9GY48 417 aaPredicted RBP20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 RPTORQ8N122 1335 aa20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CAPN2P17655 700 aa20.24■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 HSD17B4P51659 736 aa20.24■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 CPLX2Q6PUV4 134 aaKnown RBP20.24■□□□□ 0.83
COMMD3-BMI1-201ENST00000417470 DNERQ8NFT8 737 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms