RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ESYT1Q9BSJ8 1104 aa18.27■□□□□ 0.52
ITGB1-204ENST00000417122 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
ITGB1-204ENST00000417122 ASTN1O14525 1302 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 SYN1P17600 705 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 ADCYAP1R1P41586 468 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 BAATQ14032 418 aaPredicted RBP18.26■□□□□ 0.51
ITGB1-204ENST00000417122 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 CLEC4DQ8WXI8 215 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 KATNBL1Q9H079 304 aa18.26■□□□□ 0.51
ITGB1-204ENST00000417122 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
ITGB1-204ENST00000417122 ERICH2A1L162 156 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 IFIT3O14879 490 aaKnown RBP18.25■□□□□ 0.51
ITGB1-204ENST00000417122 ADAMTS4O75173 837 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 DUSP11O75319 330 aaKnown RBP18.25■□□□□ 0.51
ITGB1-204ENST00000417122 CDC37Q16543 378 aaPredicted RBP18.25■□□□□ 0.51
ITGB1-204ENST00000417122 CCDC144BQ3MJ40 725 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 USH1GQ495M9 461 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 FERMT2Q96AC1 680 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 PURBQ96QR8 312 aaKnown RBP18.25■□□□□ 0.51
ITGB1-204ENST00000417122 PRO3102Q9H379 93 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 LRRC37A2A6NM11 1700 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 MYH6P13533 1939 aa18.25■□□□□ 0.51
ITGB1-204ENST00000417122 SYNRGQ9UMZ2 1314 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 ADCY6O43306 1168 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 DHX16O60231 1041 aaKnown RBP18.24■□□□□ 0.51
ITGB1-204ENST00000417122 SLC34A2O95436 690 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 RTP1P59025 263 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 SART3Q15020 963 aaKnown RBP18.24■□□□□ 0.51
ITGB1-204ENST00000417122 RNF207Q6ZRF8 634 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 STAG2Q8N3U4 1231 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 VAT1LQ9HCJ6 419 aa18.24■□□□□ 0.51
ITGB1-204ENST00000417122 ADD3Q9UEY8 706 aaKnown RBP18.24■□□□□ 0.51
ITGB1-204ENST00000417122 DDX49Q9Y6V7 483 aaKnown RBP18.24■□□□□ 0.51
ITGB1-204ENST00000417122 CALML3P27482 149 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 WTAPQ15007 396 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 SLC30A10Q6XR72 485 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 MB21D2Q8IYB1 491 aaPredicted RBP18.23■□□□□ 0.51
ITGB1-204ENST00000417122 KLHDC9Q8NEP7 349 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 TSEN34Q9BSV6 310 aaKnown RBP18.23■□□□□ 0.51
ITGB1-204ENST00000417122 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 MAD2L2Q9UI95 211 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 ATP11BQ9Y2G3 1177 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 ABCB11O95342 1321 aa18.23■□□□□ 0.51
ITGB1-204ENST00000417122 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-204ENST00000417122 A0A1W2PQ45 241 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-204ENST00000417122 A0A1W2PQY0 241 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 ALDH5A1P51649 535 aaPredicted RBP18.22■□□□□ 0.51
ITGB1-204ENST00000417122 ANTXR2P58335 489 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
ITGB1-204ENST00000417122 TNFAIP2Q03169 654 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 SNX17Q15036 470 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 QRICH1Q2TAL8 776 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 EEPD1Q7L9B9 569 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 MORC4Q8TE76 937 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 GDF15Q99988 308 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 SPC25Q9HBM1 224 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
ITGB1-204ENST00000417122 LOC102724159A0A0B4J2E5 919 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 KLRF2D3W0D1 207 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 SLC27A2O14975 620 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 MAGEA10P43363 369 aaPredicted RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 GJA9P57773 515 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 GRM4Q14833 912 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 NECTIN1Q15223 517 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 PWP2Q15269 919 aaKnown RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 KCNA10Q16322 511 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 C1orf53Q5VUE5 145 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 FBXO11Q86XK2 927 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 FBXO16Q8IX29 292 aaPredicted RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 RGS22Q8NE09 1264 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 IGDCC4Q8TDY8 1250 aa18.21■□□□□ 0.51
ITGB1-204ENST00000417122 UPF3AQ9H1J1 476 aaKnown RBP18.21■□□□□ 0.51
ITGB1-204ENST00000417122 CEP290O15078 2479 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 MOXD2PA6NHM9 499 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 NEFLP07196 543 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 BMP8BP34820 402 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
ITGB1-204ENST00000417122 ACLYP53396 1101 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
ITGB1-204ENST00000417122 TRIM60Q495X7 471 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 CREB3L3Q68CJ9 461 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 CCSAPQ6IQ19 270 aaPredicted RBP18.2■□□□□ 0.5
ITGB1-204ENST00000417122 TAPT1Q6NXT6 567 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 NOL8Q76FK4 1167 aaKnown RBP18.2■□□□□ 0.5
ITGB1-204ENST00000417122 MAF1Q9H063 256 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 VTA1Q9NP79 307 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 PDGFCQ9NRA1 345 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms