RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
CPNE1-209ENST00000415920 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-209ENST00000415920 GJC2Q5T442 439 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-209ENST00000415920 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-209ENST00000415920 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
CPNE1-209ENST00000415920 COBLO75128 1261 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
CPNE1-209ENST00000415920 GOLGA8HP0CJ92 632 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 BMP3P12645 472 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 ADORA2AP29274 412 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 GRM4Q14833 912 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 RTN1Q16799 776 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 KCTD1Q719H9 257 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 GMCL1Q96IK5 515 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 ALDH8A1Q9H2A2 487 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-209ENST00000415920 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 STXBP5LQ9Y2K9 1186 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 IVNS1ABPQ9Y6Y0 642 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 NID2Q14112 1375 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.12
CPNE1-209ENST00000415920 SMCHD1A6NHR9 2005 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 ERCC3P19447 782 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 KIF5BP33176 963 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 RTP1P59025 263 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 CCT2P78371 535 aaKnown RBP15.82■□□□□ 0.12
CPNE1-209ENST00000415920 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 TROAPQ12815 778 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 COG2Q14746 738 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 PRAMEF19Q5SWL8 479 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 GUCD1Q96NT3 240 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 SPATC1LQ9H0A9 340 aa15.82■□□□□ 0.12
CPNE1-209ENST00000415920 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-209ENST00000415920 DNM1LO00429 736 aa15.81■□□□□ 0.12
CPNE1-209ENST00000415920 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
CPNE1-209ENST00000415920 SNHG28P0DPA3 235 aa15.81■□□□□ 0.12
CPNE1-209ENST00000415920 PDIA3P30101 505 aaKnown RBP15.81■□□□□ 0.12
CPNE1-209ENST00000415920 GPATCH4Q5T3I0 446 aaKnown RBP15.81■□□□□ 0.12
CPNE1-209ENST00000415920 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
CPNE1-209ENST00000415920 FAM161BQ96MY7 647 aa15.81■□□□□ 0.12
CPNE1-209ENST00000415920 NCOA5Q9HCD5 579 aaKnown RBP15.81■□□□□ 0.12
CPNE1-209ENST00000415920 LIMCH1Q9UPQ0 1083 aa15.81■□□□□ 0.12
CPNE1-209ENST00000415920 CUL9Q8IWT3 2517 aa15.81■□□□□ 0.12
CPNE1-209ENST00000415920 ZNFX1Q9P2E3 1918 aaKnown RBP15.8■□□□□ 0.12
CPNE1-209ENST00000415920 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 FLOT1O75955 427 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 MCM2P49736 904 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 STAT2P52630 851 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 RCAN1P53805 252 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 EVCP57679 992 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 ME3Q16798 604 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 DPP9Q86TI2 863 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 STAG2Q8N3U4 1231 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 IL27Q8NEV9 243 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 ZNF274Q96GC6 653 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-209ENST00000415920 CPVLQ9H3G5 476 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
CPNE1-209ENST00000415920 MAD2L2Q9UI95 211 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CPNE1-209ENST00000415920 POTEB2H3BUK9 544 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 CPLX1O14810 134 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 MSCO60682 206 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-209ENST00000415920 DSG3P32926 999 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 SLC16A2P36021 539 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 SCRN1Q12765 414 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 PLS1Q14651 629 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 OLFML2BQ68BL8 750 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 FANCBQ8NB91 859 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 KIFC2Q96AC6 838 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-209ENST00000415920 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-209ENST00000415920 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 A0A0C4DFX4 3053 aa15.79■□□□□ 0.12
CPNE1-209ENST00000415920 CNTNAP5Q8WYK1 1306 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 KLRF2D3W0D1 207 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-209ENST00000415920 CDC27P30260 824 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
CPNE1-209ENST00000415920 TRIM60Q495X7 471 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 C9orf50Q5SZB4 431 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 SLC39A5Q6ZMH5 540 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 TMTC3Q6ZXV5 915 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 SH3RF1Q7Z6J0 888 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 FAM160B2Q86V87 743 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 NCAPG2Q86XI2 1143 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
CPNE1-209ENST00000415920 SHCBP1Q8NEM2 672 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 FERMT2Q96AC1 680 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 MAP3K14Q99558 947 aa15.78■□□□□ 0.12
CPNE1-209ENST00000415920 LBHD1Q9BQE6 289 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-209ENST00000415920 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms