RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 GDPD5Q8WTR4 605 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 ZNF512BQ96KM6 892 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 FPGT-TNNI3KV9GXZ4 949 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 MYH1P12882 1939 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 SMARCA5O60264 1052 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 BAIAP3O94812 1187 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 TNFAIP2Q03169 654 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 ARMCX2Q7L311 632 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 PHOX2BQ99453 314 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 AP5M1Q9H0R1 490 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 PIH1D3Q9NQM4 214 aaKnown RBP16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 GRIN2DO15399 1336 aa16.14■□□□□ 0.17
RAPGEF1-204ENST00000414781 SNRNP48Q6IEG0 339 aaKnown RBP16.13■□□□□ 0.17
RAPGEF1-204ENST00000414781 TLK2Q86UE8 772 aa16.13■□□□□ 0.17
RAPGEF1-204ENST00000414781 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
RAPGEF1-204ENST00000414781 GFRA3O60609 400 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 IDH1O75874 414 aaKnown RBP16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 ZAP70P43403 619 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 KCNJ6P48051 423 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 ZP2Q05996 745 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 SIAH1Q8IUQ4 282 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 PRSS33Q8NF86 280 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 NEK9Q8TD19 979 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 EAF2Q96CJ1 260 aaPredicted RBP16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 GOPCQ9HD26 462 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 FBXO40Q9UH90 709 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 TNKSO95271 1327 aa16.12■□□□□ 0.17
RAPGEF1-204ENST00000414781 C19orf67A6NJJ6 358 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 MX1P20591 662 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 KATNBL1Q9H079 304 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 ECHDC1Q9NTX5 307 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 GNEQ9Y223 722 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 ASTN1O14525 1302 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 COL4A4P53420 1690 aaPredicted RBP16.11■□□□□ 0.17
RAPGEF1-204ENST00000414781 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 ATP2A1O14983 1001 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 ERVK-21P61565 698 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 ERMP1Q7Z2K6 904 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 CCDC144CPQ8IYA2 1237 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 ANKRD35Q8N283 1001 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 RETREG2Q8NC44 543 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 TGS1Q96RS0 853 aaKnown RBP16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 SLF1Q9BQI6 1058 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 CCDC8Q9H0W5 538 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 IRF2BPLQ9H1B7 796 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 SUGCTQ9HAC7 445 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 Q9Y3F1 56 aa16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 ZFHX2Q9C0A1 2572 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF1-204ENST00000414781 SPTBN4Q9H254 2564 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 CYP2C9P11712 490 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 BMP8AQ7Z5Y6 402 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 SPRED2Q7Z698 418 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 CLEC10AQ8IUN9 316 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 PLEKHM2Q8IWE5 1019 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 FGD4Q96M96 766 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 DBNDD2Q9BQY9 259 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 RIOK1Q9BRS2 568 aaKnown RBP16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 CRNKL1Q9BZJ0 848 aaKnown RBP16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 PARP14Q460N5 1801 aa16.09■□□□□ 0.17
RAPGEF1-204ENST00000414781 USP34Q70CQ2 3546 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 AKR1B1P15121 316 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 PDE4AP27815 886 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 PDE1AP54750 535 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 PSMC6P62333 389 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 HERC4Q5GLZ8 1057 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 FAM83BQ5T0W9 1011 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 CHST13Q8NET6 341 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 POP1Q99575 1024 aaKnown RBP16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 TRMT13Q9NUP7 481 aaKnown RBP16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 DBNLQ9UJU6 430 aaKnown RBP16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
RAPGEF1-204ENST00000414781 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 LCHNA4D1U4 455 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 ASB14A6NK59 587 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 DYNC1LI2O43237 492 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 IQCF3P0C7M6 154 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 BFSP2Q13515 415 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 PTPROQ16827 1216 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 ANKS1AQ92625 1134 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 RAD9AQ99638 391 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 POLR3EQ9NVU0 708 aa16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 CTDP1Q9Y5B0 961 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 COL11A1P12107 1806 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF1-204ENST00000414781 CACNA1HO95180 2353 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms