RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 MTMR7Q9Y216 660 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 TACC3Q9Y6A5 838 aa19.73■□□□□ 0.75
SCAMP4-204ENST00000414057 SNAI1O95863 264 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 TAL1P17542 331 aaPredicted RBP19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 ANKRD1Q15327 319 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 CCDC178Q5BJE1 867 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 C1orf53Q5VUE5 145 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 TRERF1Q96PN7 1200 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 TMEM47Q9BQJ4 181 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 PNMA2Q9UL42 364 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 ATP11BQ9Y2G3 1177 aa19.72■□□□□ 0.75
SCAMP4-204ENST00000414057 ZNFX1Q9P2E3 1918 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 ALAS1P13196 640 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 ACVR2BQ13705 512 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 CHMP4CQ96CF2 233 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 AGBL1Q96MI9 1066 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 TSEN34Q9BSV6 310 aaKnown RBP19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 SPC25Q9HBM1 224 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 PDRG1Q9NUG6 133 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 PHF24Q9UPV7 400 aa19.71■□□□□ 0.75
SCAMP4-204ENST00000414057 ZNF536O15090 1300 aa19.71■□□□□ 0.74
SCAMP4-204ENST00000414057 E7EWF7 191 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 DUSP11O75319 330 aaKnown RBP19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 PGK1P00558 417 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 RPS6KB1P23443 525 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 SNX17Q15036 470 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 CCDC174Q6PII3 467 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 BTNL9Q6UXG8 535 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 FERMT2Q96AC1 680 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 CCPG1Q9ULG6 757 aa19.7■□□□□ 0.74
SCAMP4-204ENST00000414057 ASB14A6NK59 587 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 ICAM1P05362 532 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 MDM2Q00987 491 aaPredicted RBP19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 LRIT3Q3SXY7 679 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 ARMCX2Q7L311 632 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 IQCA1Q86XH1 822 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 FAM133AQ8N9E0 248 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 NUP133Q8WUM0 1156 aa19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 A1CFQ9NQ94 594 aaKnown RBP19.69■□□□□ 0.74
SCAMP4-204ENST00000414057 MOXD2PA6NHM9 499 aa19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 DGKHQ86XP1 1220 aa19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 CCDC144CPQ8IYA2 1237 aa19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 RANBP17Q9H2T7 1088 aaKnown RBP19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 PLXNA1Q9UIW2 1896 aa19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 TRIOBPQ9H2D6 2365 aa19.68■□□□□ 0.74
SCAMP4-204ENST00000414057 ADAMTS4O75173 837 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 HSP90AA1P07900 732 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 GPR153Q6NV75 609 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 DHX32Q7L7V1 743 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 TBC1D10CQ8IV04 446 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 PCSK9Q8NBP7 692 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 ZSCAN31Q96LW9 406 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 PRDM5Q9NQX1 630 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 LIMCH1Q9UPQ0 1083 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 WDR19Q8NEZ3 1342 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 A0A1W2PQ45 241 aaPredicted RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 A0A1W2PQY0 241 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 PDHBP11177 359 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 AK2P54819 239 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 CNTN2Q02246 1040 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 TRDNQ13061 729 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 TRIM60Q495X7 471 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 GPATCH4Q5T3I0 446 aaKnown RBP19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 STOX1Q6ZVD7 989 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 NCOA7Q8NI08 942 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 FGD4Q96M96 766 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 CNNM2Q9H8M5 875 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 GPCPD1Q9NPB8 672 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 STARD7Q9NQZ5 370 aa19.67■□□□□ 0.74
SCAMP4-204ENST00000414057 SYNRGQ9UMZ2 1314 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 RANBP2P49792 3224 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 SLC16A2P36021 539 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 SNAP25P60880 206 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 TTBK2Q6IQ55 1244 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 RALYLQ86SE5 291 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 FBXL16Q8N461 479 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 KLHDC9Q8NEP7 349 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 KRT23Q9C075 422 aa19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 SH2B1Q9NRF2 756 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 ADD3Q9UEY8 706 aaKnown RBP19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 FRMPD2Q68DX3 1309 aaPredicted RBP19.66■□□□□ 0.74
SCAMP4-204ENST00000414057 C6orf222P0C671 652 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 SNHG28P0DPA3 235 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 CST5P28325 142 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 ACLYP53396 1101 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 ZNF543Q08ER8 600 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 NSMFQ6X4W1 530 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 RASGRP2Q7LDG7 609 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 LENG1Q96BZ8 264 aaPredicted RBP19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 TMX3Q96JJ7 454 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 GLT1D1Q96MS3 346 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 CYP39A1Q9NYL5 469 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 NEDD4P46934 1319 aa19.65■□□□□ 0.74
SCAMP4-204ENST00000414057 SOX1O00570 391 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 KDM4AO75164 1064 aa19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 GJA9P57773 515 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms