RNA–Protein interactions for RNA: ENST00000412866.2

VSIG4-202, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 2 BASIC

Gene VSIG4, Length 1,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-202ENST00000412866 TYRO3Q06418 890 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 LETM2Q2VYF4 491 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 USH1GQ495M9 461 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 SPECC1Q5M775 1068 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 MCTP2Q6DN12 878 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 ZNF280CQ8ND82 737 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
VSIG4-202ENST00000412866 SLF1Q9BQI6 1058 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 SDF4Q9BRK5 362 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 FZD1Q9UP38 647 aa11.05□□□□□ -0.64
VSIG4-202ENST00000412866 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 NEMFO60524 1076 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 CCNT1O60563 726 aaKnown RBP11.04□□□□□ -0.64
VSIG4-202ENST00000412866 XRCC6P12956 609 aaKnown RBP eCLIP11.04□□□□□ -0.64
VSIG4-202ENST00000412866 VCAM1P19320 739 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 BACE1P56817 501 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 SPP2Q13103 211 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 AP3B2Q13367 1082 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 CCDC174Q6PII3 467 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 SASS6Q6UVJ0 657 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.04□□□□□ -0.64
VSIG4-202ENST00000412866 FBXO28Q9NVF7 368 aa11.04□□□□□ -0.64
VSIG4-202ENST00000412866 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L15C9J2P7 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L13C9JLJ4 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L11C9JVI0 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L18D6R9N7 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L22D6RA61 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L17D6RBQ6 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L19D6RCP7 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L20D6RJB6 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 OR52Z1P0C646 297 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 TAL1P17542 331 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-202ENST00000412866 LONP1P36776 959 aaKnown RBP11.03□□□□□ -0.64
VSIG4-202ENST00000412866 PRPHP41219 470 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L24Q0WX57 530 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 IL17AQ16552 155 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 USP17L6PQ6QN14 398 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 SAMD1Q6SPF0 538 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-202ENST00000412866 DTHD1Q6ZMT9 781 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 SYMPKQ92797 1274 aaKnown RBP11.03□□□□□ -0.64
VSIG4-202ENST00000412866 C12orf42Q96LP6 360 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 TANGO6Q9C0B7 1094 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 TMEM60Q9H2L4 133 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 TAF1DQ9H5J8 278 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-202ENST00000412866 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
VSIG4-202ENST00000412866 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 ZHX2Q9Y6X8 837 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 SCN4AP35499 1836 aa11.03□□□□□ -0.64
VSIG4-202ENST00000412866 C19orf81C9J6K1 198 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 MEIS2O14770 477 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 OPLAHO14841 1288 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 POLR2DO15514 142 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 PPP1R12BO60237 982 aaPredicted RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 FLOT1O75955 427 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 ABCB11O95342 1321 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 GCFC2P16383 781 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 NF2P35240 595 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 MAP3K9P80192 1104 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 DGKZQ13574 1117 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 PRKG1Q13976 671 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 VGLL4Q14135 290 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 STX1AQ16623 288 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 LONRF3Q496Y0 759 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 DLK2Q6UY11 383 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 KRBA2Q6ZNG9 492 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 USP49Q70CQ1 688 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 PRPF38AQ8NAV1 312 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 CNNM3Q8NE01 707 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 PHIPQ8WWQ0 1821 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 CDCA5Q96FF9 252 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 ANO3Q9BYT9 981 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 PPP1R9AQ9ULJ8 1098 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 MRPL11Q9Y3B7 192 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 CSADQ9Y600 493 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 SNCAIPQ9Y6H5 919 aa11.02□□□□□ -0.65
VSIG4-202ENST00000412866 POLR2AP24928 1970 aaKnown RBP11.02□□□□□ -0.65
VSIG4-202ENST00000412866 SPDYE3A6NKU9 549 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 TDP2O95551 362 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
VSIG4-202ENST00000412866 ICAM1P05362 532 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 TXLNAP40222 546 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 IREB2P48200 963 aaKnown RBP11.01□□□□□ -0.65
VSIG4-202ENST00000412866 EAPPQ56P03 285 aaPredicted RBP11.01□□□□□ -0.65
VSIG4-202ENST00000412866 PPP4R3AQ6IN85 833 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.01□□□□□ -0.65
VSIG4-202ENST00000412866 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 EPSTI1Q96J88 318 aa11.01□□□□□ -0.65
VSIG4-202ENST00000412866 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms