RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 PABPC1P11940 636 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 LCP1P13796 627 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 IFNGR1P15260 489 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SYN1P17600 705 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 NCLP19338 710 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CDK11BP21127 795 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 IBSPP21815 317 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CD96P40200 585 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 NEK4P51957 841 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ANAPC15P60006 121 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 HNRNPUQ00839 825 aaKnown RBP eCLIP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 TNK2Q07912 1038 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SCRN1Q12765 414 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 BNIP3Q12983 259 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 STRN3Q13033 797 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 PABPC4Q13310 644 aaKnown RBP eCLIP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 HSP90AA2PQ14568 343 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ZNF460Q14592 562 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 TCEA2Q15560 299 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CLEC16AQ2KHT3 1053 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SKOR2Q2VWA4 1001 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 BBS9Q3SYG4 887 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SFRP5Q5T4F7 317 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 RNF187Q5TA31 235 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SCARA3Q6AZY7 606 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GTF2IRD2BQ6EKJ0 949 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 DENND5AQ6IQ26 1287 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CRTC3Q6UUV7 619 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SEZ6L2Q6UXD5 910 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ZNF574Q6ZN55 896 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ARHGAP27Q6ZUM4 889 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 USP53Q70EK8 1073 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ZNF765Q7L2R6 523 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 FAM214BQ7L5A3 538 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SPRED2Q7Z698 418 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GTF2IRD2Q86UP8 949 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ZNF227Q86WZ6 799 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SCUBE1Q8IWY4 988 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 LRRC47Q8N1G4 583 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 NXPE1Q8N323 547 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 C19orf47Q8N9M1 422 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KCT2Q8NC54 265 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 FBXO15Q8NCQ5 510 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SLC7A14Q8TBB6 771 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GATA6Q92908 595 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 OSBP2Q969R2 916 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CHAMP1Q96JM3 812 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 HRASLS5Q96KN8 279 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 MRGPRX3Q96LB0 322 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 HSPA12BQ96MM6 686 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 FCRL3Q96P31 734 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 AARSD1Q9BTE6 412 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KLHL25Q9H0H3 589 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GBP3Q9H0R5 595 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GSX1Q9H4S2 264 aaPredicted RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 PCDH12Q9NPG4 1184 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 MBNL3Q9NUK0 354 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 TMEM260Q9NX78 707 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 BTG4Q9NY30 223 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CLEC1BQ9P126 229 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 MRPS23Q9Y3D9 190 aaKnown RBP1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 PCDHB12Q9Y5F1 795 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 PCDHA8Q9Y5H6 950 aa1.74□□□□□ -2.13
RNU6-1054P-201ENST00000411293 TMEM265A0A087WTH1 108 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 A0A087X0B3 334 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SSU72P8A0A1W2PR75 194 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 IQCA1LA6NCM1 817 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 TCAF2A6NFQ2 919 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 C2orf71A6NGG8 1288 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ENPP3O14638 875 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KCNK3O14649 394 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 MARCH6O60337 910 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 MSCO60682 206 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KPNA6O60684 536 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 RASGRP1O95267 797 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CRTAMO95727 393 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GLI1P08151 1106 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 SYPP08247 313 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CD8BP10966 210 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ITGA4P13612 1032 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 RPL10P27635 214 aaKnown RBP1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 TPP2P29144 1249 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CTSKP43235 329 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ID4P47928 161 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 GALK1P51570 392 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 NFKB2Q00653 900 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 AMPD2Q01433 879 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CYP4F3Q08477 520 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 NMIQ13287 307 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KIR3DS1Q14943 382 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 NTRK3Q16288 839 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 KCNA10Q16322 511 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 IFI16Q16666 785 aaKnown RBP1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 ANKRD39Q53RE8 183 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 PLEKHG4Q58EX7 1191 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 CT47A1Q5JQC4 288 aaPredicted RBP1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 MPZL3Q6UWV2 235 aa1.73□□□□□ -2.13
RNU6-1054P-201ENST00000411293 LHFPL2Q6ZUX7 228 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms