RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 UBE2Q1Q7Z7E8 422 aa12.1□□□□□ -0.47
FAM49A-202ENST00000406434 HTATIP2Q9BUP3 242 aa12.1□□□□□ -0.47
FAM49A-202ENST00000406434 RANBP17Q9H2T7 1088 aaKnown RBP12.1□□□□□ -0.47
FAM49A-202ENST00000406434 PLXNA1Q9UIW2 1896 aa12.1□□□□□ -0.47
FAM49A-202ENST00000406434 BRCA2P51587 3418 aa12.1□□□□□ -0.47
FAM49A-202ENST00000406434 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
FAM49A-202ENST00000406434 IGHA2P01877 340 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 ICAM1P05362 532 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
FAM49A-202ENST00000406434 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 CYBAP13498 195 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 MUM1L1Q5H9M0 696 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
FAM49A-202ENST00000406434 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 C11orf49Q9H6J7 331 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 PPP4R2Q9NY27 417 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
FAM49A-202ENST00000406434 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 SLC27A2O14975 620 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 SEPT4O43236 478 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 MSCO60682 206 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 CDC45O75419 566 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 WTAPQ15007 396 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 SART3Q15020 963 aaKnown RBP12.08□□□□□ -0.48
FAM49A-202ENST00000406434 SEC23AQ15436 765 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 TMEM67Q5HYA8 995 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 A1CFQ9NQ94 594 aaKnown RBP12.08□□□□□ -0.48
FAM49A-202ENST00000406434 ZNF236Q9UL36 1845 aa12.08□□□□□ -0.48
FAM49A-202ENST00000406434 MKI67P46013 3256 aaKnown RBP12.08□□□□□ -0.48
FAM49A-202ENST00000406434 EVI5O60447 810 aa12.07□□□□□ -0.48
FAM49A-202ENST00000406434 BAATQ14032 418 aaPredicted RBP12.07□□□□□ -0.48
FAM49A-202ENST00000406434 USH1GQ495M9 461 aa12.07□□□□□ -0.48
FAM49A-202ENST00000406434 GJC2Q5T442 439 aaPredicted RBP12.07□□□□□ -0.48
FAM49A-202ENST00000406434 CREB3L3Q68CJ9 461 aa12.07□□□□□ -0.48
FAM49A-202ENST00000406434 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
FAM49A-202ENST00000406434 STAG2Q8N3U4 1231 aa12.07□□□□□ -0.48
FAM49A-202ENST00000406434 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
FAM49A-202ENST00000406434 ZHX1Q9UKY1 873 aaPredicted RBP12.07□□□□□ -0.48
FAM49A-202ENST00000406434 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 H0YGN5 161 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
FAM49A-202ENST00000406434 NECTIN1Q15223 517 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
FAM49A-202ENST00000406434 CCDC144CPQ8IYA2 1237 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
FAM49A-202ENST00000406434 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 ARRDC4Q8NCT1 418 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
FAM49A-202ENST00000406434 SENP6Q9GZR1 1112 aaPredicted RBP12.06□□□□□ -0.48
FAM49A-202ENST00000406434 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
FAM49A-202ENST00000406434 CYP39A1Q9NYL5 469 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 NR2E3Q9Y5X4 410 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 PFASO15067 1338 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 MCM3APO60318 1980 aa12.06□□□□□ -0.48
FAM49A-202ENST00000406434 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 SOWAHBA6NEL2 793 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 NFIBO00712 420 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 PRC1O43663 620 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ZNF865P0CJ78 1059 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 RARBP10826 455 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 CALML3P27482 149 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 MCM5P33992 734 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 TIE1P35590 1138 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ANTXR2P58335 489 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ACVR2BQ13705 512 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 MAMDC4Q6UXC1 1216 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 CATIPQ7Z7H3 387 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 MB21D2Q8IYB1 491 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 IGDCC4Q8TDY8 1250 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 FGD4Q96M96 766 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ASB14A6NK59 587 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 PGK1P00558 417 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 AKR1A1P14550 325 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ERICH6BQ5W0A0 696 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 NOL8Q76FK4 1167 aaKnown RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 EEPD1Q7L9B9 569 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 C7orf61Q8IZ16 206 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 CLEC4DQ8WXI8 215 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
FAM49A-202ENST00000406434 LRRC2Q9BYS8 371 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 ABHD16BQ9H3Z7 469 aa12.05□□□□□ -0.48
FAM49A-202ENST00000406434 JMJD4Q9H9V9 463 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms