RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 MTRQ99707 1265 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 VPS16Q9H269 839 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 GDF3Q9NR23 364 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
RETREG1-202ENST00000399793 ADAM22Q9P0K1 906 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 SERTAD1Q9UHV2 236 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 THRAP3Q9Y2W1 955 aaKnown RBP9.63□□□□□ -0.87
RETREG1-202ENST00000399793 FAM208AQ9UK61 1670 aaKnown RBP9.63□□□□□ -0.87
RETREG1-202ENST00000399793 MYH10P35580 1976 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 CHGBP05060 677 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 PARP1P09874 1014 aaKnown RBP9.63□□□□□ -0.87
RETREG1-202ENST00000399793 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
RETREG1-202ENST00000399793 CXCR5P32302 372 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 KRT83P78385 493 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 SEPT2Q15019 361 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 Q4G0T1 1027 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 TTC39AQ5SRH9 613 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 BEND3Q5T5X7 828 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 OR2W6PQ8NHA6 318 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 ANKRD24Q8TF21 1146 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 OPTNQ96CV9 577 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 FGD4Q96M96 766 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 PSMB7Q99436 277 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 LRRC42Q9Y546 428 aa9.63□□□□□ -0.87
RETREG1-202ENST00000399793 IGF2BP3O00425 579 aaKnown RBP eCLIP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 POLD1P28340 1107 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 GALNT17Q6IS24 598 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 ZNF662Q6ZS27 426 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 NDNQ99608 321 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 PHAXQ9H814 394 aaKnown RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 RBM12Q9NTZ6 932 aaKnown RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 DLGAP2Q9P1A6 1054 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 POLR2DO15514 142 aaKnown RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 ZNF189O75820 626 aaPredicted RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 KRT16P08779 473 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 PAX3P23760 479 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 NCALDP61601 193 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 TRIM14Q14142 442 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 KRT31Q15323 416 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 SFMBT2Q5VUG0 894 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 TRPM8Q7Z2W7 1104 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 SMCR8Q8TEV9 937 aaPredicted RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 MAP3K14Q99558 947 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 RANBP17Q9H2T7 1088 aaKnown RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 STK38LQ9Y2H1 464 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 CACNA1FO60840 1977 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 FOXO3O43524 673 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 HEXIM1O94992 359 aaKnown RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 EIF4BP23588 611 aaKnown RBP9.62□□□□□ -0.87
RETREG1-202ENST00000399793 DEUP1Q05D60 604 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 TEFQ10587 303 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 NFRKBQ6P4R8 1299 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 FAM114A1Q8IWE2 563 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 PHC3Q8NDX5 983 aa9.62□□□□□ -0.87
RETREG1-202ENST00000399793 TTC26A0AVF1 554 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 SMAPO00193 183 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 COBLO75128 1261 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 ZNF24P17028 368 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 PSMC4P43686 418 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 KLC1Q07866 573 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 CUL4BQ13620 913 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 ITIH4Q14624 930 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 FOXB2Q5VYV0 432 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 LCA5Q86VQ0 697 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 KIF2BQ8N4N8 673 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 ARL10Q8N8L6 244 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 TRIM7Q9C029 511 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 PLCB1Q9NQ66 1216 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
RETREG1-202ENST00000399793 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.61□□□□□ -0.87
RETREG1-202ENST00000399793 AFF2P51816 1311 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 SEMA3EO15041 775 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 UBOX5O94941 541 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 RARAP10276 462 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 DESP17661 470 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 ATP6V1C1P21283 382 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 TRADDQ15628 312 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 OR52E8Q6IFG1 317 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 WDR59Q6PJI9 974 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 APBB1IPQ7Z5R6 666 aaPredicted RBP9.61□□□□□ -0.87
RETREG1-202ENST00000399793 LONP2Q86WA8 852 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 NME9Q86XW9 330 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 AFAP1Q8N556 730 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 DYDC1Q8WWB3 177 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 CASKIN2Q8WXE0 1202 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 IFT43Q96FT9 208 aa9.61□□□□□ -0.87
RETREG1-202ENST00000399793 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
RETREG1-202ENST00000399793 ECT2Q9H8V3 914 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms