RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 MAF1Q9H063 256 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 RNF146Q9NTX7 359 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
CYCSP55-201ENST00000399027 CNTNAP5Q8WYK1 1306 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 MCM3APO60318 1980 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 IGHA2P01877 340 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 ALAS1P13196 640 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 NEK4P51957 841 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 KCTD2Q14681 263 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 CLEC4DQ8WXI8 215 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 PIGSQ96S52 555 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 MMP19Q99542 508 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 APBA2Q99767 749 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
CYCSP55-201ENST00000399027 ABCB11O95342 1321 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 COBLO75128 1261 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 TAL1P17542 331 aaPredicted RBP12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 TRAF1Q13077 416 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 NTRK3Q16288 839 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 ZNF792Q3KQV3 632 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 TRMT44Q8IYL2 757 aaKnown RBP12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 NPLOC4Q8TAT6 608 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 RRP36Q96EU6 259 aaKnown RBP12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 A1CFQ9NQ94 594 aaKnown RBP12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 PFASO15067 1338 aa12.11□□□□□ -0.47
CYCSP55-201ENST00000399027 NFIBO00712 420 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 ADCY3O60266 1144 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 CYP2B6P20813 491 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 GRK4P32298 578 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 GHRHRQ02643 423 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 RABEP1Q15276 862 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 USH1GQ495M9 461 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 ANKRD35Q8N283 1001 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 TRIB2Q92519 343 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 CYP39A1Q9NYL5 469 aa12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
CYCSP55-201ENST00000399027 OPLAHO14841 1288 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 PFKFB2O60825 505 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 IFNAR1P17181 557 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 SLC9C1Q4G0N8 1177 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 SAMD3Q8N6K7 520 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 DDX11Q96FC9 970 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 FLRT1Q9NZU1 646 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 MRPL11Q9Y3B7 192 aaKnown RBP12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 PCDHA1Q9Y5I3 950 aa12.09□□□□□ -0.47
CYCSP55-201ENST00000399027 CENPFP49454 3210 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 hCG_1984214I3L0E3 225 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 HMGCRP04035 888 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 PGK2P07205 417 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 ELNP15502 786 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 SCRN1Q12765 414 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 CCL14Q16627 93 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 ME3Q16798 604 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 MAMDC4Q6UXC1 1216 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 RNF207Q6ZRF8 634 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 CCDC82Q8N4S0 544 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 ZNF713Q8N859 430 aaPredicted RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 SH3TC2Q8TF17 1288 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 ZNF333Q96JL9 665 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 FGD4Q96M96 766 aa12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 SLKQ9H2G2 1235 aaPredicted RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 NCOA5Q9HCD5 579 aaKnown RBP12.08□□□□□ -0.48
CYCSP55-201ENST00000399027 RBM27Q9P2N5 1060 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms