RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ZNF513Q8N8E2 541 aaPredicted RBP10.25□□□□□ -0.77
ATL3-201ENST00000398868 MCUQ8NE86 351 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 PDZD8Q8NEN9 1154 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 KIAA1524Q8TCG1 905 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 GJA10Q969M2 543 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SCYL1Q96KG9 808 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SYNDIG1Q9H7V2 258 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 FAM8A1Q9UBU6 413 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 CLIC2O15247 247 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 ZMYND10O75800 440 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 CDC25AP30304 524 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 CYP26C1Q6V0L0 522 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 OTUD6AQ7L8S5 288 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 NLRP4Q96MN2 994 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 PDE11AQ9HCR9 933 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SLC5A4Q9NY91 659 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 TTC41PQ6P2S7 1318 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 IL13P35225 146 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 MYL5Q02045 173 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 PPM1KQ8N3J5 372 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 DDX41Q9UJV9 622 aaKnown RBP10.25□□□□□ -0.77
ATL3-201ENST00000398868 ZNF804BA4D1E1 1349 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SFI1A8K8P3 1242 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 KLRF2D3W0D1 207 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 MMP10P09238 476 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 LRRC41Q15345 812 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 DENND2CQ68D51 928 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 GPR161Q8N6U8 529 aaKnown RBP10.25□□□□□ -0.77
ATL3-201ENST00000398868 SPATS2LQ9NUQ6 558 aaKnown RBP10.25□□□□□ -0.77
ATL3-201ENST00000398868 RNF181Q9P0P0 153 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 SERTAD1Q9UHV2 236 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 EXOC7Q9UPT5 735 aa10.25□□□□□ -0.77
ATL3-201ENST00000398868 IFT88Q13099 833 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PAK1Q13153 545 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 TAOK1Q7L7X3 1001 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PCDHA12Q9UN75 941 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATL3-201ENST00000398868 MROH5Q6ZUA9 1318 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 ESYT2A0FGR8 921 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 USP17L8P0C7I0 530 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 DYNLT1P63172 113 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 MTERF2Q49AM1 385 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 SLFN13Q68D06 897 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 CCDC105Q8IYK2 499 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 SYNE4Q8N205 404 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PTH1RQ03431 593 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 SPAG1Q07617 926 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 KCTD2Q14681 263 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 USP26Q9BXU7 913 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 CAPS2Q9BXY5 557 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 VPS37BQ9H9H4 285 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PANK4Q9NVE7 773 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PHKG2P15735 406 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 RASSF2P50749 326 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 HDAC1Q13547 482 aaPredicted RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 R3HDM1Q15032 1099 aaKnown RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 RBBP5Q15291 538 aaKnown RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 GNPTABQ3T906 1256 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 TRIM50Q86XT4 487 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 SMYD4Q8IYR2 804 aaPredicted RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 CDC26Q8NHZ8 85 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 GIGYF1O75420 1035 aaPredicted RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 USP17L2Q6R6M4 530 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PNMA1Q8ND90 353 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 CNKSR1Q969H4 720 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 UBN1Q9NPG3 1134 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 ELP1O95163 1332 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 LRRD1A4D1F6 860 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 STK10O94804 968 aaKnown RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 ZNF202O95125 648 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PLCD1P51178 756 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 ZSCAN10Q96SZ4 725 aaPredicted RBP10.24□□□□□ -0.77
ATL3-201ENST00000398868 CPVLQ9H3G5 476 aa10.24□□□□□ -0.77
ATL3-201ENST00000398868 PLEKHG3A1L390 1219 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 HIP1RO75146 1068 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 TRPA1O75762 1119 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 CD58P19256 250 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 TNFAIP1Q13829 316 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 KRT40Q6A162 431 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 IFNL3Q8IZI9 196 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 SECISBP2LQ93073 1101 aaKnown RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 RAB3IPQ96QF0 476 aaPredicted RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 DCTPP1Q9H773 170 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 PABPC4Q13310 644 aaKnown RBP eCLIP10.23□□□□□ -0.772e-16■□□□□ 11
ATL3-201ENST00000398868 RSRC2Q7L4I2 434 aaKnown RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 SNX21Q969T3 373 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 ERBB3P21860 1342 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 NSD2O96028 1365 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 PSMD2Q13200 908 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 FAM133BQ5BKY9 247 aaKnown RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 USP17L3A6NCW0 530 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms