RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 BTDP43251 543 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 SATB1Q01826 763 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 PRR16Q569H4 304 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 XKR9Q5GH70 373 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ZMYND15Q9H091 742 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 DDX41Q9UJV9 622 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 PCDHA12Q9UN75 941 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CLNS1AP54105 237 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ICA1Q05084 483 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 ASPHQ12797 758 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 SEPT2Q15019 361 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CERKLQ49MI3 558 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 GPATCH4Q5T3I0 446 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 PNMA1Q8ND90 353 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 SMCR8Q8TEV9 937 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 DHTKD1Q96HY7 919 aaPredicted RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 GSDMAQ96QA5 445 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 TRIM56Q9BRZ2 755 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 PLEKHG1Q9ULL1 1385 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 HSPD1P10809 573 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 EEF1GP26641 437 aaKnown RBP6.83□□□□□ -1.32
PGBD4-201ENST00000397766 CYP2J2P51589 502 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 PLA2G4DQ86XP0 818 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 LEMD3Q9Y2U8 911 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 MAP3K15Q6ZN16 1313 aa6.83□□□□□ -1.32
PGBD4-201ENST00000397766 FMNL1O95466 1100 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 S100BP04271 92 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 H2AFZP0C0S5 128 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 SETSIPP0DME0 302 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 NSFP46459 744 aaKnown RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 PLCB4Q15147 1175 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 H2AFVQ71UI9 128 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 CCHCR1Q8TD31 782 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ATG3Q9NT62 314 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 STAP2Q9UGK3 403 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 USP17L12C9JPN9 530 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 USP17L21D6R901 530 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 KCNK3O14649 394 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 EVI5O60447 810 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 TECP42680 631 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 MYL7Q01449 175 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ADAM9Q13443 819 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 FAM26FQ5R3K3 315 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 FAM178BQ8IXR5 827 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 TRMT44Q8IYL2 757 aaKnown RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 FAM71BQ8TC56 605 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 RILPQ96NA2 401 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 LCMT1Q9UIC8 334 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 PCDHA4Q9UN74 947 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 XDHP47989 1333 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ARHGEF37A1IGU5 675 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 TESPA1A2RU30 521 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 TMEM191BP0C7N4 346 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 PTPREP23469 700 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 GTF2IP78347 998 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ARMCX5Q6P1M9 558 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 SEPT14Q6ZU15 432 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 BBS5Q8N3I7 341 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 DCPSQ96C86 337 aaKnown RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 COPRSQ9NQ92 184 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ABCA5Q8WWZ7 1642 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ARHGEF5Q12774 1597 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ATP7BP35670 1465 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 RPAP1Q9BWH6 1393 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ATP8B3O60423 1300 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 KLRF2D3W0D1 207 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 CAPN9O14815 690 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 ZNF853P0CG23 659 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 CCNA1P78396 465 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 TCP10Q12799 353 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 BFSP1Q12934 665 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 BIRC2Q13490 618 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 CDC37Q16543 378 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 RNF26Q9BY78 433 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 NLRC4Q9NPP4 1024 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 FAM8A1Q9UBU6 413 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 IKBKBO14920 756 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 RPS6KA2Q15349 733 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 C10orf76Q5T2E6 689 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 SLFN13Q68D06 897 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
PGBD4-201ENST00000397766 RNF14Q9UBS8 474 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 CHD1O14646 1710 aa6.82□□□□□ -1.32
PGBD4-201ENST00000397766 TLR3O15455 904 aaKnown RBP6.81□□□□□ -1.32
PGBD4-201ENST00000397766 ZNF500O60304 480 aaPredicted RBP6.81□□□□□ -1.32
PGBD4-201ENST00000397766 ECM2O94769 699 aaPredicted RBP6.81□□□□□ -1.32
PGBD4-201ENST00000397766 HSPA6P17066 643 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 SLC8A1P32418 973 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 ALCAMQ13740 583 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 LONRF3Q496Y0 759 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 RSPH3Q86UC2 560 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 CTAGE3PQ8IX95 158 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 AMNQ9BXJ7 453 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 TMEM206Q9H813 350 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 MTMR6Q9Y217 621 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 A6NJR5 290 aa6.81□□□□□ -1.32
PGBD4-201ENST00000397766 ZNF233A6NK53 670 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms