RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 FANCBQ8NB91 859 aa29.46■■■□□ 2.31
TSPAN4-207ENST00000397411 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.46■■■□□ 2.312e-6■■■■□ 22.9
TSPAN4-207ENST00000397411 BAZ2BQ9UIF8 2168 aaKnown RBP29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 KLF18A0A0U1RQI7 1052 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 POTEFA5A3E0 1075 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 ZBTB43O43298 467 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 CNGA1P29973 690 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 RUFY3Q7L099 469 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 PIBF1Q8WXW3 757 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 AMNQ9BXJ7 453 aa29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 A1CFQ9NQ94 594 aaKnown RBP29.45■■■□□ 2.31
TSPAN4-207ENST00000397411 ABCB11O95342 1321 aa29.45■■■□□ 2.3
TSPAN4-207ENST00000397411 PTPDC1A2A3K4 754 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 ZBTB5O15062 677 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 GJB1P08034 283 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 TRAF1Q13077 416 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 DEFB118Q96PH6 123 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 PIGSQ96S52 555 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 TM6SF1Q9BZW5 370 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 RIOX1Q9H6W3 641 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 ZSWIM6Q9HCJ5 1215 aa29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 MRPL11Q9Y3B7 192 aaKnown RBP29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 KIAA0100Q14667 2235 aaKnown RBP29.44■■■□□ 2.3
TSPAN4-207ENST00000397411 DNAJC25-GNG10A0A024R161 153 aa29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 TFRCP02786 760 aaKnown RBP29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 APOA5Q6Q788 366 aa29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 BRF1Q92994 677 aa29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 TINF2Q9BSI4 451 aa29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 CYP39A1Q9NYL5 469 aa29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 BRPF3Q9ULD4 1205 aa29.43■■■□□ 2.3
TSPAN4-207ENST00000397411 NFIBO00712 420 aa29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 SEC24BO95487 1268 aa29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 EN2P19622 333 aaPredicted RBP29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 APOBRQ0VD83 1088 aa29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 BAATQ14032 418 aaPredicted RBP29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 MAP3K21Q5TCX8 1036 aa29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 RNF207Q6ZRF8 634 aa29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 RRP36Q96EU6 259 aaKnown RBP29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 RBM28Q9NW13 759 aaKnown RBP29.42■■■□□ 2.3
TSPAN4-207ENST00000397411 PNMA6FA0A0J9YX94 578 aa29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 SMARCA1P28370 1054 aa29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 CCND3P30281 292 aaPredicted RBP29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 CNTN2Q02246 1040 aa29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 RTN1Q16799 776 aa29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 MCF2L2Q86YR7 1114 aa29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 SEC63Q9UGP8 760 aaKnown RBP29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 PCDHA1Q9Y5I3 950 aa29.41■■■□□ 2.3
TSPAN4-207ENST00000397411 GOLGA8AA7E2F4 631 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 GOLGA8BA8MQT2 603 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 CYTH3O43739 400 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 SGPL1O95470 568 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 CALML3P27482 149 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 ANAPC15P60006 121 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 PRAMEF19Q5SWL8 479 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 CCDC82Q8N4S0 544 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 MSL3Q8N5Y2 521 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 U2AF1L4Q8WU68 220 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 CLEC4DQ8WXI8 215 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 MTMR8Q96EF0 704 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 SPZ1Q9BXG8 430 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 UPF3BQ9BZI7 483 aaKnown RBP29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 PDRG1Q9NUG6 133 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 CNPY2Q9Y2B0 182 aa29.4■■■□□ 2.3
TSPAN4-207ENST00000397411 PLEKHA8P1O95397 391 aa29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 GJA8P48165 433 aa29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 ZNF467Q7Z7K2 595 aaPredicted RBP29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 CMTR1Q8N1G2 835 aaKnown RBP29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 SRBD1Q8N5C6 995 aaKnown RBP29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 FAM133AQ8N9E0 248 aa29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 PAK6Q9NQU5 681 aaPredicted RBP29.39■■■□□ 2.3
TSPAN4-207ENST00000397411 SLC35G1Q2M3R5 365 aa29.38■■■□□ 2.29
TSPAN4-207ENST00000397411 C8orf34Q49A92 452 aa29.38■■■□□ 2.29
TSPAN4-207ENST00000397411 ADD3Q9UEY8 706 aaKnown RBP29.38■■■□□ 2.29
TSPAN4-207ENST00000397411 ASB14A6NK59 587 aa29.37■■■□□ 2.29
TSPAN4-207ENST00000397411 METAP2P50579 478 aaKnown RBP eCLIP29.37■■■□□ 2.29
TSPAN4-207ENST00000397411 TMTC3Q6ZXV5 915 aa29.37■■■□□ 2.29
TSPAN4-207ENST00000397411 FBXL16Q8N461 479 aa29.37■■■□□ 2.29
TSPAN4-207ENST00000397411 RGS22Q8NE09 1264 aa29.37■■■□□ 2.29
TSPAN4-207ENST00000397411 CCDC196A0A1B0GTZ2 297 aa29.36■■■□□ 2.29
TSPAN4-207ENST00000397411 SOWAHBA6NEL2 793 aa29.36■■■□□ 2.29
TSPAN4-207ENST00000397411 PPP2R5BQ15173 497 aa29.36■■■□□ 2.29
TSPAN4-207ENST00000397411 MAMDC4Q6UXC1 1216 aa29.36■■■□□ 2.29
TSPAN4-207ENST00000397411 NRBP1Q9UHY1 535 aa29.36■■■□□ 2.29
TSPAN4-207ENST00000397411 SYNGAP1Q96PV0 1343 aa29.36■■■□□ 2.29
TSPAN4-207ENST00000397411 RBBP6Q7Z6E9 1792 aaKnown RBP29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 IGHA2P01877 340 aa29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 CAPN2P17655 700 aa29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 RCAN1P53805 252 aa29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 RPS6P62753 249 aaKnown RBP29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 SLC30A10Q6XR72 485 aa29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 MPHOSPH6Q99547 160 aaKnown RBP29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.35■■■□□ 2.29
TSPAN4-207ENST00000397411 PPP1R11O60927 126 aaPredicted RBP29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 CFBP00751 764 aa29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 CYBAP13498 195 aa29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 TRPV1Q8NER1 839 aa29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 AGXT2Q9BYV1 514 aa29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 MAF1Q9H063 256 aa29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 ZHX1Q9UKY1 873 aaPredicted RBP29.34■■■□□ 2.29
TSPAN4-207ENST00000397411 HTTP42858 3142 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms