RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ACER1Q8TDN7 264 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 SENP6Q9GZR1 1112 aaPredicted RBP15.35■□□□□ 0.05
SEC13-209ENST00000397117 BTBD7Q9P203 1132 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 DDX20Q9UHI6 824 aaKnown RBP15.35■□□□□ 0.05
SEC13-209ENST00000397117 RLFQ13129 1914 aa15.35■□□□□ 0.05
SEC13-209ENST00000397117 JAK2O60674 1132 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 CDC27P30260 824 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 KIF5BP33176 963 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 NOVP48745 357 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 USP14P54578 494 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 ICA1Q05084 483 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 GRB14Q14449 540 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 SEPT2Q15019 361 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
SEC13-209ENST00000397117 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 SMARCC2Q8TAQ2 1214 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 LPAR1Q92633 364 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 DDX11Q96FC9 970 aa15.34■□□□□ 0.05
SEC13-209ENST00000397117 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 VCAM1P19320 739 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 PDCP20941 246 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 NUCB2P80303 420 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 CLEC10AQ8IUN9 316 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 TRPV1Q8NER1 839 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 GUCD1Q96NT3 240 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 MAP3K14Q99558 947 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 FEZ1Q99689 392 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 MTMR7Q9Y216 660 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 LTBP2Q14767 1821 aa15.33■□□□□ 0.04
SEC13-209ENST00000397117 MSCO60682 206 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 DTNBO60941 627 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 LRRC47Q8N1G4 583 aaKnown RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 FAM217BQ9NTX9 383 aaPredicted RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 NYAP2Q9P242 653 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 SPDYE16A6NNV3 312 aaPredicted RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 DNM1LO00429 736 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 PPFIA3O75145 1194 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 EEF2P13639 858 aaKnown RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 PDIA4P13667 645 aaKnown RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 CYP2C19P33261 490 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 SSRP1Q08945 709 aaKnown RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 WDR78Q5VTH9 848 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 LARP1BQ659C4 914 aaKnown RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 TRIM22Q8IYM9 498 aa15.32■□□□□ 0.04
SEC13-209ENST00000397117 LBHD1Q9BQE6 289 aaPredicted RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 ZNFX1Q9P2E3 1918 aaKnown RBP15.32■□□□□ 0.04
SEC13-209ENST00000397117 PARP1P09874 1014 aaKnown RBP15.31■□□□□ 0.04
SEC13-209ENST00000397117 CYBAP13498 195 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 IFNAR1P17181 557 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 CNGA1P29973 690 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 GNAQP50148 359 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 ATN1P54259 1190 aaPredicted RBP15.31■□□□□ 0.04
SEC13-209ENST00000397117 AKAP17AQ02040 695 aaKnown RBP15.31■□□□□ 0.04
SEC13-209ENST00000397117 GRM4Q14833 912 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 MKL1Q969V6 931 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 COL25A1Q9BXS0 654 aaPredicted RBP15.31■□□□□ 0.04
SEC13-209ENST00000397117 RPAP3Q9H6T3 665 aaPredicted RBP15.31■□□□□ 0.04
SEC13-209ENST00000397117 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 ORC3Q9UBD5 711 aaPredicted RBP15.31■□□□□ 0.04
SEC13-209ENST00000397117 IVNS1ABPQ9Y6Y0 642 aa15.31■□□□□ 0.04
SEC13-209ENST00000397117 ZNF236Q9UL36 1845 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 RAD21O60216 631 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 SYT1P21579 422 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 RTP1P59025 263 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 NTRK3Q16288 839 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 CCDC82Q8N4S0 544 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 PHKBQ93100 1093 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 SLC26A6Q9BXS9 759 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 SMCHD1A6NHR9 2005 aa15.3■□□□□ 0.04
SEC13-209ENST00000397117 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
SEC13-209ENST00000397117 STX6O43752 255 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 OLFML2BQ68BL8 750 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEC13-209ENST00000397117 CMTR1Q8N1G2 835 aaKnown RBP15.29■□□□□ 0.04
SEC13-209ENST00000397117 WASF1Q92558 559 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 LZTS2Q9BRK4 669 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 MOV10L1Q9BXT6 1211 aaKnown RBP15.29■□□□□ 0.04
SEC13-209ENST00000397117 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 UNC80Q8N2C7 3258 aa15.29■□□□□ 0.04
SEC13-209ENST00000397117 H3BQV1 296 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 STRNO43815 780 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 COG2Q14746 738 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 GJC2Q5T442 439 aaPredicted RBP15.28■□□□□ 0.04
SEC13-209ENST00000397117 SLC39A5Q6ZMH5 540 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 ARRDC4Q8NCT1 418 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 SYNPO2Q9UMS6 1093 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
SEC13-209ENST00000397117 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
SEC13-209ENST00000397117 PALM3A6NDB9 673 aaPredicted RBP15.28■□□□□ 0.04
SEC13-209ENST00000397117 PDHBP11177 359 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 FDPSP14324 419 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms