RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 IQCA1Q86XH1 822 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 MAGEB6P1A0A0J9YX57 407 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 VGLL3A8MV65 326 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 SMIM22K7EJ46 135 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 MAGEA9P43362 315 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 FOXR1Q6PIV2 292 aa14.93□□□□□ -0.02
TRIM40-207ENST00000396581 SRBD1Q8N5C6 995 aaKnown RBP14.93□□□□□ -0.02
TRIM40-207ENST00000396581 A0A1B0GUL6 1792 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 SRGNP10124 158 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 SCG2P13521 617 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 HOXA10P31260 410 aaPredicted RBP14.92□□□□□ -0.02
TRIM40-207ENST00000396581 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
TRIM40-207ENST00000396581 TMED8Q6PL24 325 aaPredicted RBP14.92□□□□□ -0.02
TRIM40-207ENST00000396581 CCDC170Q8IYT3 715 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 RETREG2Q8NC44 543 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 AFAP1L1Q8TED9 768 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 RSPH14Q9UHP6 348 aa14.92□□□□□ -0.02
TRIM40-207ENST00000396581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRIM40-207ENST00000396581 EIF3CLB5ME19 914 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 KRT86O43790 486 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 KLRC4O43908 158 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 SHOX2O60902 331 aaPredicted RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 PPFIA4O75335 1185 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 NOP2P46087 812 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 DNM2P50570 870 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 CORO7P57737 925 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 CDK17Q00537 523 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 NAALADL2Q58DX5 795 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 CCDC122Q5T0U0 273 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 PIK3AP1Q6ZUJ8 805 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 ZNF572Q7Z3I7 529 aaPredicted RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 NOC3LQ8WTT2 800 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 RPGRQ92834 1020 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 EIF3CQ99613 913 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 DISC1Q9NRI5 854 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 HDAC6Q9UBN7 1215 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 ENC1O14682 589 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 RHOBTB3O94955 611 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 PMS1P54277 932 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 ITIH3Q06033 890 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 TTI2Q6NXR4 508 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 RUBCNQ92622 972 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 NUP58Q9BVL2 599 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 TNS1Q9HBL0 1735 aaKnown RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 RGPD3A6NKT7 1758 aaPredicted RBP14.91□□□□□ -0.02
TRIM40-207ENST00000396581 RGPD4Q7Z3J3 1758 aa14.91□□□□□ -0.02
TRIM40-207ENST00000396581 RASSF10A6NK89 507 aa14.9□□□□□ -0.02
TRIM40-207ENST00000396581 ORC4O43929 436 aa14.9□□□□□ -0.02
TRIM40-207ENST00000396581 PHACTR2O75167 634 aa14.9□□□□□ -0.02
TRIM40-207ENST00000396581 MCM7P33993 719 aa14.9□□□□□ -0.02
TRIM40-207ENST00000396581 CYLC1P35663 651 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-207ENST00000396581 CCNI2Q6ZMN8 369 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-207ENST00000396581 GIMAP8Q8ND71 665 aaPredicted RBP14.9□□□□□ -0.02
TRIM40-207ENST00000396581 JAKMIP2Q96AA8 810 aa14.9□□□□□ -0.02
TRIM40-207ENST00000396581 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
TRIM40-207ENST00000396581 TRIM49BA6NDI0 452 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 M0R2N6 131 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 AGPSO00116 658 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 BBOX1O75936 387 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 KLRK1P26718 216 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 NLRP5P59047 1200 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 STIM1Q13586 685 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 TSR1Q2NL82 804 aaKnown RBP14.89□□□□□ -0.03
TRIM40-207ENST00000396581 FIGNQ5HY92 759 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 RBM17Q96I25 401 aaKnown RBP14.89□□□□□ -0.03
TRIM40-207ENST00000396581 CAMKK2Q96RR4 588 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 CCSER1Q9C0I3 900 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 SH3GLB2Q9NR46 395 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 KBTBD4Q9NVX7 518 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 LEMD3Q9Y2U8 911 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 COL1A1P02452 1464 aaPredicted RBP14.89□□□□□ -0.03
TRIM40-207ENST00000396581 SRGAP2O75044 1071 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 CALML3P27482 149 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 HIBADHP31937 336 aaKnown RBP14.89□□□□□ -0.03
TRIM40-207ENST00000396581 STAT6P42226 847 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 GOLGA6L1Q8N7Z2 621 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 DHTKD1Q96HY7 919 aaPredicted RBP14.89□□□□□ -0.03
TRIM40-207ENST00000396581 CRAMP1Q96RY5 1269 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 LACRTQ9GZZ8 138 aa14.89□□□□□ -0.03
TRIM40-207ENST00000396581 A0A1W2PQJ5 194 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 RCCD1A6NED2 376 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 PDE2AO00408 941 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-207ENST00000396581 ADAMTS3O15072 1205 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 ZBED6P86452 979 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 MMGT1Q8N4V1 131 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 IPO4Q8TEX9 1081 aaKnown RBP14.88□□□□□ -0.03
TRIM40-207ENST00000396581 AENQ8WTP8 325 aaKnown RBP14.88□□□□□ -0.03
TRIM40-207ENST00000396581 DUSP9Q99956 384 aaKnown RBP14.88□□□□□ -0.03
TRIM40-207ENST00000396581 ANKIB1Q9P2G1 1089 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 MAPK8IP1Q9UQF2 711 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 CYP2D7A0A087X1C5 515 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 PSMA7O14818 248 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 CPP00450 1065 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 PRLRP16471 622 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 TXNRD3Q86VQ6 643 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 ZSCAN29Q8IWY8 852 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-207ENST00000396581 SELENOOQ9BVL4 669 aa14.88□□□□□ -0.03
TRIM40-207ENST00000396581 NHEJ1Q9H9Q4 299 aaPredicted RBP14.88□□□□□ -0.03
TRIM40-207ENST00000396581 EXOC1Q9NV70 894 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms