RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PRDM1O75626 825 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 EHHADHQ08426 723 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 CNBD1Q8NA66 436 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 H7C0C1 242 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 RNMTO43148 476 aaKnown RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 ATP5OP48047 213 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 TAF11Q15544 211 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 MROH5Q6ZUA9 1318 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 ATP6V1E1P36543 226 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 RASSF7Q02833 373 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 ANKRD35Q8N283 1001 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 SPATA5Q8NB90 893 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 JPH2Q9BR39 696 aaPredicted RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 KDRP35968 1356 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 SPOUT1Q5T280 376 aaKnown RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 FAM178BQ8IXR5 827 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 ZNF274Q96GC6 653 aaPredicted RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 YTHDC2Q9H6S0 1430 aaKnown RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 MYSM1Q5VVJ2 828 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 SPATA1Q5VX52 437 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 CPXCR1Q8N123 301 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 PHLPP2Q6ZVD8 1323 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 ART3Q13508 389 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 OTUD7AQ8TE49 926 aaPredicted RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 SERPINI1Q99574 410 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 DBNDD2Q9BQY9 259 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 TM6SF1Q9BZW5 370 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
COL4A3-202ENST00000396578 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
COL4A3-202ENST00000396578 SNX1Q13596 522 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 LPIN2Q92539 896 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
COL4A3-202ENST00000396578 TFCP2L1Q9NZI6 479 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
COL4A3-202ENST00000396578 TRPM2O94759 1503 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 PLB1Q6P1J6 1458 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 ATICP31939 592 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 POLE2P56282 527 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 IQCB1Q15051 598 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 FANCLQ9NW38 375 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 FAM8A1Q9UBU6 413 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 TTI1O43156 1089 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 KLHL29Q96CT2 875 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 CHMP6Q96FZ7 201 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 ACTR5Q9H9F9 607 aaPredicted RBP15.21■□□□□ 0.03
COL4A3-202ENST00000396578 ANGPTL3Q9Y5C1 460 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 BRD1O95696 1058 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
COL4A3-202ENST00000396578 LPXNO60711 386 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 POLR3CQ9BUI4 534 aaPredicted RBP15.21■□□□□ 0.03
COL4A3-202ENST00000396578 JRKLQ9Y4A0 524 aa15.21■□□□□ 0.03
COL4A3-202ENST00000396578 H2AFZP0C0S5 128 aa15.21■□□□□ 0.02
COL4A3-202ENST00000396578 NSFP46459 744 aaKnown RBP15.21■□□□□ 0.02
COL4A3-202ENST00000396578 H2AFVQ71UI9 128 aa15.21■□□□□ 0.02
COL4A3-202ENST00000396578 PPM1KQ8N3J5 372 aa15.21■□□□□ 0.02
COL4A3-202ENST00000396578 HESX1Q9UBX0 185 aa15.21■□□□□ 0.02
COL4A3-202ENST00000396578 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.02
COL4A3-202ENST00000396578 ARHGEF16Q5VV41 709 aa15.21■□□□□ 0.02
COL4A3-202ENST00000396578 ST13P4Q8IZP2 240 aaPredicted RBP15.21■□□□□ 0.02
COL4A3-202ENST00000396578 PACSIN2Q9UNF0 486 aaPredicted RBP15.21■□□□□ 0.02
COL4A3-202ENST00000396578 ZKSCAN8Q15776 578 aaPredicted RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 MAP7D3Q8IWC1 876 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 BLIDQ8IZY5 108 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 ATP8A2Q9NTI2 1148 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 CPP00450 1065 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 DLATP10515 647 aaKnown RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 MSH2P43246 934 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 EXOC3L4Q17RC7 722 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 FAM133BQ5BKY9 247 aaKnown RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 POLD1P28340 1107 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 NAA35Q5VZE5 725 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 FGD4Q96M96 766 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 NVLO15381 856 aaKnown RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 GTPBP6O43824 516 aaPredicted RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 ABL1P00519 1130 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 ARPP21Q9UBL0 812 aaPredicted RBP15.2■□□□□ 0.02
COL4A3-202ENST00000396578 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 CMA1P23946 247 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 TRIM11Q96F44 468 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 EPB41L5Q9HCM4 733 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
COL4A3-202ENST00000396578 A0A087WUV0 522 aaPredicted RBP15.19■□□□□ 0.02
COL4A3-202ENST00000396578 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 CCHCR1Q8TD31 782 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 TRIM15Q9C019 465 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 MAGEF1Q9HAY2 307 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 DAAM1Q9Y4D1 1078 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 GJA3Q9Y6H8 435 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 TMED2Q15363 201 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 GNPTABQ3T906 1256 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms