RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 RGPD3A6NKT7 1758 aaPredicted RBP18.18■□□□□ 0.5
SNX6-202ENST00000396526 RGPD4Q7Z3J3 1758 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 CASP1P29466 404 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 TXKP42681 527 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 SEPT2Q15019 361 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 TECP42680 631 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 CCZ1BP86790 482 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 CCZ1P86791 482 aaPredicted RBP18.18■□□□□ 0.5
SNX6-202ENST00000396526 SPECC1LQ69YQ0 1117 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 LRWD1Q9UFC0 647 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 PAXBP1Q9Y5B6 917 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 FOCADQ5VW36 1801 aa18.18■□□□□ 0.5
SNX6-202ENST00000396526 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 USP17L10C9JJH3 530 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 KCNJ6P48051 423 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 KCNB1Q14721 858 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 PRMT6Q96LA8 375 aaPredicted RBP18.17■□□□□ 0.5
SNX6-202ENST00000396526 SAMSN1Q9NSI8 373 aaKnown RBP18.17■□□□□ 0.5
SNX6-202ENST00000396526 RWDD2AQ9UIY3 292 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 SLX4Q8IY92 1834 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 DPF2Q92785 391 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 TMEM260Q9NX78 707 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 CTNND2Q9UQB3 1225 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 PCDHA1Q9Y5I3 950 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 DYNC1I1O14576 645 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 PSMA7O14818 248 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 TUBB4AP04350 444 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 KRT79Q5XKE5 535 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 MYRIPQ8NFW9 859 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX6-202ENST00000396526 ARHGEF10LQ9HCE6 1279 aa18.17■□□□□ 0.5
SNX6-202ENST00000396526 PPP1R3GB7ZBB8 358 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 F5H6K3 240 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 KLRC3Q07444 240 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 PPFIBP1Q86W92 1011 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 DNAJC18Q9H819 358 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 PDIA5Q14554 519 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 SYNPO2Q9UMS6 1093 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 PPP4R3AQ6IN85 833 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 ARMCX5Q6P1M9 558 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 AMNQ9BXJ7 453 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 KBTBD4Q9NVX7 518 aa18.16■□□□□ 0.5
SNX6-202ENST00000396526 MYH8P13535 1937 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 PP2D1A8MPX8 630 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 RAD17O75943 681 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 SV2BQ7L1I2 683 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 SMYD4Q8IYR2 804 aaPredicted RBP18.15■□□□□ 0.5
SNX6-202ENST00000396526 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 MTMR8Q96EF0 704 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 PLIN2Q99541 437 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 EXOC1Q9NV70 894 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 STK17AQ9UEE5 414 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
SNX6-202ENST00000396526 H7C1D1 291 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 GDF11O95390 407 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 PLCG1P19174 1290 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 QRICH1Q2TAL8 776 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 CCAR2Q8N163 923 aaKnown RBP18.15■□□□□ 0.5
SNX6-202ENST00000396526 NELFBQ8WX92 580 aa18.15■□□□□ 0.5
SNX6-202ENST00000396526 YDJCA8MPS7 323 aa18.14■□□□□ 0.5
SNX6-202ENST00000396526 GH2P01242 217 aa18.14■□□□□ 0.5
SNX6-202ENST00000396526 FXR2P51116 673 aaKnown RBP eCLIP18.14■□□□□ 0.5
SNX6-202ENST00000396526 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.5
SNX6-202ENST00000396526 FAM151AQ8WW52 585 aa18.14■□□□□ 0.5
SNX6-202ENST00000396526 GMCL1Q96IK5 515 aa18.14■□□□□ 0.5
SNX6-202ENST00000396526 MAGEC2Q9UBF1 373 aaPredicted RBP18.14■□□□□ 0.5
SNX6-202ENST00000396526 TNS1Q9HBL0 1735 aaKnown RBP18.14■□□□□ 0.49
SNX6-202ENST00000396526 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 TCP10L2B9ZVM9 353 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 VIL1P09327 827 aaKnown RBP18.14■□□□□ 0.49
SNX6-202ENST00000396526 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 BMP3P12645 472 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 CREBRFQ8IUR6 639 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 TRMT1Q9NXH9 659 aaKnown RBP18.14■□□□□ 0.49
SNX6-202ENST00000396526 CD44P16070 742 aaKnown RBP18.14■□□□□ 0.49
SNX6-202ENST00000396526 ASIC1P78348 528 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 CEP135Q66GS9 1140 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 IGSF22Q8N9C0 903 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 KCND1Q9NSA2 647 aa18.14■□□□□ 0.49
SNX6-202ENST00000396526 RGS17Q9UGC6 210 aaPredicted RBP18.14■□□□□ 0.49
SNX6-202ENST00000396526 DDX25Q9UHL0 483 aaKnown RBP18.14■□□□□ 0.49
SNX6-202ENST00000396526 A0A1B0GTH6 734 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 DPEP1P16444 411 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 HOXA7P31268 230 aaPredicted RBP18.13■□□□□ 0.49
SNX6-202ENST00000396526 FBXO11Q86XK2 927 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 ZNRF3Q9ULT6 936 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 PSMD14O00487 310 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 N4BP3O15049 544 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 ZSCAN12O43309 604 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 FOSP01100 380 aaPredicted RBP18.13■□□□□ 0.49
SNX6-202ENST00000396526 AP3B2Q13367 1082 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 NR1I3Q14994 352 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 UBE2SQ16763 222 aa18.13■□□□□ 0.49
SNX6-202ENST00000396526 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms