RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ADORA2AP29274 412 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 ADD1P35611 737 aaKnown RBP22.26■■□□□ 1.15
HOXA9-202ENST00000396345 RGS2P41220 211 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 MAP2K5Q13163 448 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 RABEP1Q15276 862 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 USH1GQ495M9 461 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 USP6NLQ92738 828 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 ZNFX1Q9P2E3 1918 aaKnown RBP22.25■■□□□ 1.15
HOXA9-202ENST00000396345 CYP2B6P20813 491 aa22.25■■□□□ 1.15
HOXA9-202ENST00000396345 CCT2P78371 535 aaKnown RBP22.25■■□□□ 1.15
HOXA9-202ENST00000396345 IRF5Q13568 498 aa22.25■■□□□ 1.15
HOXA9-202ENST00000396345 MUM1L1Q5H9M0 696 aa22.25■■□□□ 1.15
HOXA9-202ENST00000396345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.25■■□□□ 1.15
HOXA9-202ENST00000396345 ANKRD35Q8N283 1001 aa22.25■■□□□ 1.15
HOXA9-202ENST00000396345 AMNQ9BXJ7 453 aa22.25■■□□□ 1.15
HOXA9-202ENST00000396345 SEC63Q9UGP8 760 aaKnown RBP22.25■■□□□ 1.15
HOXA9-202ENST00000396345 TPCN1Q9ULQ1 816 aa22.25■■□□□ 1.15
HOXA9-202ENST00000396345 PPP1R11O60927 126 aaPredicted RBP22.24■■□□□ 1.15
HOXA9-202ENST00000396345 STK3Q13188 491 aa22.24■■□□□ 1.15
HOXA9-202ENST00000396345 NOL8Q76FK4 1167 aaKnown RBP22.24■■□□□ 1.15
HOXA9-202ENST00000396345 DPP9Q86TI2 863 aa22.24■■□□□ 1.15
HOXA9-202ENST00000396345 ABCB11O95342 1321 aa22.24■■□□□ 1.15
HOXA9-202ENST00000396345 ZNF236Q9UL36 1845 aa22.24■■□□□ 1.15
HOXA9-202ENST00000396345 ADCY3O60266 1144 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 FUT2Q10981 343 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 TRAF1Q13077 416 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 DDX11Q96FC9 970 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 APBA2Q99767 749 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 NCOA5Q9HCD5 579 aaKnown RBP22.23■■□□□ 1.15
HOXA9-202ENST00000396345 SLC5A4Q9NY91 659 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 MRPL11Q9Y3B7 192 aaKnown RBP22.23■■□□□ 1.15
HOXA9-202ENST00000396345 PCDHA1Q9Y5I3 950 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 CNTNAP5Q8WYK1 1306 aa22.23■■□□□ 1.15
HOXA9-202ENST00000396345 COBLO75128 1261 aa22.22■■□□□ 1.15
HOXA9-202ENST00000396345 PGK2P07205 417 aa22.22■■□□□ 1.15
HOXA9-202ENST00000396345 XRCC5P13010 732 aaKnown RBP22.22■■□□□ 1.15
HOXA9-202ENST00000396345 CLEC4DQ8WXI8 215 aa22.22■■□□□ 1.15
HOXA9-202ENST00000396345 SLKQ9H2G2 1235 aaPredicted RBP22.22■■□□□ 1.15
HOXA9-202ENST00000396345 hCG_1642624A0A1W2PR95 340 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 NFIBO00712 420 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 PFKFB2O60825 505 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 HOXC6P09630 235 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 GRK4P32298 578 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 NSMFQ6X4W1 530 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 SLAIN1Q8ND83 568 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 PXYLP1Q8TE99 480 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 A1CFQ9NQ94 594 aaKnown RBP22.21■■□□□ 1.15
HOXA9-202ENST00000396345 V9GY48 417 aaPredicted RBP22.21■■□□□ 1.15
HOXA9-202ENST00000396345 PFASO15067 1338 aa22.21■■□□□ 1.15
HOXA9-202ENST00000396345 ELNP15502 786 aa22.2■■□□□ 1.14
HOXA9-202ENST00000396345 NTRK3Q16288 839 aa22.2■■□□□ 1.14
HOXA9-202ENST00000396345 SLC9C1Q4G0N8 1177 aa22.2■■□□□ 1.14
HOXA9-202ENST00000396345 TRMT44Q8IYL2 757 aaKnown RBP22.2■■□□□ 1.14
HOXA9-202ENST00000396345 IL27Q8NEV9 243 aa22.2■■□□□ 1.14
HOXA9-202ENST00000396345 NPLOC4Q8TAT6 608 aa22.2■■□□□ 1.14
HOXA9-202ENST00000396345 DNAJC25-GNG10A0A024R161 153 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 PTPDC1A2A3K4 754 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 CPLX1O14810 134 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 ST18O60284 1047 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 IFNAR1P17181 557 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 SCRN1Q12765 414 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 ME3Q16798 604 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 ZNF792Q3KQV3 632 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 MCF2L2Q86YR7 1114 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 CYP39A1Q9NYL5 469 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 LIMCH1Q9UPQ0 1083 aa22.19■■□□□ 1.14
HOXA9-202ENST00000396345 PLXNA1Q9UIW2 1896 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 CCDC85CA6NKD9 419 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 POTEB2H3BUK9 544 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 BAATQ14032 418 aaPredicted RBP22.18■■□□□ 1.14
HOXA9-202ENST00000396345 CCL14Q16627 93 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 CPLX2Q6PUV4 134 aaKnown RBP22.18■■□□□ 1.14
HOXA9-202ENST00000396345 RNF207Q6ZRF8 634 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 RGS22Q8NE09 1264 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 SH3TC2Q8TF17 1288 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 PHKBQ93100 1093 aa22.18■■□□□ 1.14
HOXA9-202ENST00000396345 BIN2Q9UBW5 565 aaPredicted RBP22.18■■□□□ 1.14
HOXA9-202ENST00000396345 DIS3Q9Y2L1 958 aaKnown RBP22.18■■□□□ 1.14
HOXA9-202ENST00000396345 PRPF3O43395 683 aaKnown RBP22.17■■□□□ 1.14
HOXA9-202ENST00000396345 LARGE1O95461 756 aa22.17■■□□□ 1.14
HOXA9-202ENST00000396345 AKAP17AQ02040 695 aaKnown RBP22.17■■□□□ 1.14
HOXA9-202ENST00000396345 CNTN2Q02246 1040 aa22.17■■□□□ 1.14
HOXA9-202ENST00000396345 TRIB2Q92519 343 aa22.17■■□□□ 1.14
HOXA9-202ENST00000396345 MAML3Q96JK9 1138 aa22.17■■□□□ 1.14
HOXA9-202ENST00000396345 MAF1Q9H063 256 aa22.17■■□□□ 1.14
HOXA9-202ENST00000396345 FLRT1Q9NZU1 646 aa22.17■■□□□ 1.14
HOXA9-202ENST00000396345 RBM27Q9P2N5 1060 aaKnown RBP22.17■■□□□ 1.14
HOXA9-202ENST00000396345 PPFIA3O75145 1194 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 HMGCRP04035 888 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 CALML3P27482 149 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 OLFML2BQ68BL8 750 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 HEATR3Q7Z4Q2 680 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 NECAB1Q8N987 351 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 FAM133AQ8N9E0 248 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 TBC1D5Q92609 795 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 SLC26A6Q9BXS9 759 aa22.16■■□□□ 1.14
HOXA9-202ENST00000396345 RNF26Q9BY78 433 aaPredicted RBP22.16■■□□□ 1.14
HOXA9-202ENST00000396345 RBBP6Q7Z6E9 1792 aaKnown RBP22.15■■□□□ 1.14
HOXA9-202ENST00000396345 OPLAHO14841 1288 aa22.15■■□□□ 1.14
HOXA9-202ENST00000396345 CFBP00751 764 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms