RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CUL5Q93034 780 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 ZNF70Q9UC06 446 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-202ENST00000396033 NFE2L3Q9Y4A8 694 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 TNNI2P48788 182 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 UBASH3AP57075 661 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 ORC2Q13416 577 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-202ENST00000396033 UBE2SQ16763 222 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 RRAGBQ5VZM2 374 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 LRRC8AQ8IWT6 810 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 ENOX1Q8TC92 643 aaKnown RBP13.73□□□□□ -0.21
ITGB1-202ENST00000396033 MTMR8Q96EF0 704 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.73□□□□□ -0.21
ITGB1-202ENST00000396033 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 ZNRF3Q9ULT6 936 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 CUL4BQ13620 913 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 ERCC5P28715 1186 aaPredicted RBP13.72□□□□□ -0.21
ITGB1-202ENST00000396033 GSDMDP57764 484 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 HSP90AA4PQ58FG1 418 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 KLHL10Q6JEL2 608 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 MTRQ99707 1265 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
ITGB1-202ENST00000396033 DYNC1I1O14576 645 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 QRICH1Q2TAL8 776 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 AK8Q96MA6 479 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
ITGB1-202ENST00000396033 F5H6K3 240 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
ITGB1-202ENST00000396033 JAG1P78504 1218 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 KLRC3Q07444 240 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 CDC37Q16543 378 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-202ENST00000396033 SMYD4Q8IYR2 804 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-202ENST00000396033 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 DPF2Q92785 391 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.21
ITGB1-202ENST00000396033 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 CABP7Q86V35 215 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 FAM151AQ8WW52 585 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 PLIN2Q99541 437 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 NUP88Q99567 741 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-202ENST00000396033 SYNRGQ9UMZ2 1314 aa13.71□□□□□ -0.21
ITGB1-202ENST00000396033 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
ITGB1-202ENST00000396033 NDUFB10O96000 172 aa13.71□□□□□ -0.22
ITGB1-202ENST00000396033 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.22
ITGB1-202ENST00000396033 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.22
ITGB1-202ENST00000396033 TGFB2P61812 414 aa13.71□□□□□ -0.22
ITGB1-202ENST00000396033 IKQ13123 557 aaPredicted RBP13.71□□□□□ -0.22
ITGB1-202ENST00000396033 CALCRLQ16602 461 aa13.71□□□□□ -0.22
ITGB1-202ENST00000396033 CT47A1Q5JQC4 288 aaPredicted RBP13.71□□□□□ -0.22
ITGB1-202ENST00000396033 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.22
ITGB1-202ENST00000396033 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.22
ITGB1-202ENST00000396033 TDP2O95551 362 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 POLD1P28340 1107 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 TECP42680 631 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
ITGB1-202ENST00000396033 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 GMCL1Q96IK5 515 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 MED15Q96RN5 788 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 SLC37A4O43826 429 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 RPN1P04843 607 aaKnown RBP13.7□□□□□ -0.22
ITGB1-202ENST00000396033 ZNF18P17022 549 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 CLK2P49760 499 aaKnown RBP13.7□□□□□ -0.22
ITGB1-202ENST00000396033 STX17P56962 302 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-202ENST00000396033 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 CNTNAP1P78357 1384 aa13.7□□□□□ -0.22
ITGB1-202ENST00000396033 TXKP42681 527 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 PPP1R1BQ9UD71 204 aaPredicted RBP13.69□□□□□ -0.22
ITGB1-202ENST00000396033 PLCG1P19174 1290 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
ITGB1-202ENST00000396033 CTNND2Q9UQB3 1225 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 PPP1R3GB7ZBB8 358 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 SKILP12757 684 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 CXCL9Q07325 125 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 TMEM266Q2M3C6 531 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
ITGB1-202ENST00000396033 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 BMP3P12645 472 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 SYDE2Q5VT97 1194 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 SPATA1Q5VX52 437 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 SNAP25P60880 206 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 CCZ1BP86790 482 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 CCZ1P86791 482 aaPredicted RBP13.68□□□□□ -0.22
ITGB1-202ENST00000396033 TMEM39BQ9GZU3 492 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 CUEDC2Q9H467 287 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 A0A1W2PRG0 241 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 EDIL3O43854 480 aa13.68□□□□□ -0.22
ITGB1-202ENST00000396033 SFPQP23246 707 aaKnown RBP eCLIP13.68□□□□□ -0.22
ITGB1-202ENST00000396033 ZNF658Q5TYW1 1059 aaPredicted RBP13.68□□□□□ -0.22
ITGB1-202ENST00000396033 CIAPIN1Q6FI81 312 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms