RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
ATG4A-205ENST00000394892 MYH8P13535 1937 aa10.44□□□□□ -0.74
ATG4A-205ENST00000394892 KBTBD13C9JR72 458 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 ZNF213O14771 459 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-205ENST00000394892 ICAM1P05362 532 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 RARBP10826 455 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 AKR1A1P14550 325 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 IKQ13123 557 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-205ENST00000394892 TKFCQ3LXA3 575 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 CCDC144BQ3MJ40 725 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 CYB5R4Q7L1T6 521 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 ENAHQ8N8S7 591 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-205ENST00000394892 TTC14Q96N46 770 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 UBA5Q9GZZ9 404 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 SENP2Q9HC62 589 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 PDGFCQ9NRA1 345 aa10.43□□□□□ -0.74
ATG4A-205ENST00000394892 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-205ENST00000394892 A0A1W2PQ45 241 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-205ENST00000394892 A0A1W2PQY0 241 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 PCP11498 1178 aaKnown RBP10.42□□□□□ -0.74
ATG4A-205ENST00000394892 TLE2Q04725 743 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 BAATQ14032 418 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-205ENST00000394892 SEC23AQ15436 765 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 TAPT1Q6NXT6 567 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 STOX1Q6ZVD7 989 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 DGKHQ86XP1 1220 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 MORC4Q8TE76 937 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 TBC1D5Q92609 795 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 ESR2Q92731 530 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 FAM161BQ96MY7 647 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-205ENST00000394892 UPF3AQ9H1J1 476 aaKnown RBP10.42□□□□□ -0.74
ATG4A-205ENST00000394892 PDLIM7Q9NR12 457 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 FAM184BQ9ULE4 1060 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 CCPG1Q9ULG6 757 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 ATP11BQ9Y2G3 1177 aa10.42□□□□□ -0.74
ATG4A-205ENST00000394892 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-205ENST00000394892 HIP1O00291 1037 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 SGSM2O43147 1006 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 DUSP11O75319 330 aaKnown RBP10.41□□□□□ -0.74
ATG4A-205ENST00000394892 CYP21A2P08686 494 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 EPHB4P54760 987 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
ATG4A-205ENST00000394892 NKX3-2P78367 333 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 KCNA10Q16322 511 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 NSMFQ6X4W1 530 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 SLC30A10Q6XR72 485 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 ZSCAN10Q96SZ4 725 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-205ENST00000394892 ABHD16BQ9H3Z7 469 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 RNF41Q9H4P4 317 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-205ENST00000394892 PRDM5Q9NQX1 630 aaPredicted RBP10.41□□□□□ -0.74
ATG4A-205ENST00000394892 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
ATG4A-205ENST00000394892 FRMPD3Q5JV73 1810 aa10.41□□□□□ -0.74
ATG4A-205ENST00000394892 GRIN2DO15399 1336 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 TNKSO95271 1327 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 SMPD1P17405 629 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 CST5P28325 142 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-205ENST00000394892 CDK7P50613 346 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 ACLYP53396 1101 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 GJA9P57773 515 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 ANTXR2P58335 489 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 BEX3Q00994 111 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 C9orf50Q5SZB4 431 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 FBXO16Q8IX29 292 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-205ENST00000394892 PNMA1Q8ND90 353 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 GUCD1Q96NT3 240 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 TSEN34Q9BSV6 310 aaKnown RBP10.4□□□□□ -0.74
ATG4A-205ENST00000394892 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
ATG4A-205ENST00000394892 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
ATG4A-205ENST00000394892 RBAK-RBAKDNI3L0D1 243 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 OPLAHO14841 1288 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 PPP1R11O60927 126 aaPredicted RBP10.39□□□□□ -0.75
ATG4A-205ENST00000394892 FAAP100Q0VG06 881 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 IMMTQ16891 758 aaKnown RBP10.39□□□□□ -0.75
ATG4A-205ENST00000394892 EEPD1Q7L9B9 569 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 RNF180Q86T96 592 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 ADGRF4Q8IZF3 695 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 BADQ92934 168 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 JMJD4Q9H9V9 463 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 COL20A1Q9P218 1284 aa10.39□□□□□ -0.75
ATG4A-205ENST00000394892 WDR19Q8NEZ3 1342 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 RAD50Q92878 1312 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
ATG4A-205ENST00000394892 ASB14A6NK59 587 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 ASGR1P07306 291 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 C6orf222P0C671 652 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-205ENST00000394892 EDNRBP24530 442 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 ALDH5A1P51649 535 aaPredicted RBP10.38□□□□□ -0.75
ATG4A-205ENST00000394892 RPS6P62753 249 aaKnown RBP10.38□□□□□ -0.75
ATG4A-205ENST00000394892 SMAD3P84022 425 aaKnown RBP10.38□□□□□ -0.75
ATG4A-205ENST00000394892 TNFAIP2Q03169 654 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 SHHQ15465 462 aa10.38□□□□□ -0.75
ATG4A-205ENST00000394892 ANKRD33Q7Z3H0 272 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms