RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 WWC2Q6AWC2 1192 aa15.32■□□□□ 0.04
USP44-202ENST00000393091 MCF2L2Q86YR7 1114 aa15.32■□□□□ 0.04
USP44-202ENST00000393091 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
USP44-202ENST00000393091 SEC63Q9UGP8 760 aaKnown RBP15.32■□□□□ 0.04
USP44-202ENST00000393091 NPY5RQ15761 445 aa15.32■□□□□ 0.04
USP44-202ENST00000393091 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
USP44-202ENST00000393091 V9GY48 417 aaPredicted RBP15.32■□□□□ 0.04
USP44-202ENST00000393091 CPLX1O14810 134 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
USP44-202ENST00000393091 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 ACAD9Q9H845 621 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 MYH7BA7E2Y1 1941 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 BECN1Q14457 450 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 KIF3AQ9Y496 699 aa15.31■□□□□ 0.04
USP44-202ENST00000393091 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
USP44-202ENST00000393091 R3HDMLQ9H3Y0 253 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 GJD2Q9UKL4 321 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 GPR25O00155 361 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
USP44-202ENST00000393091 PTPREP23469 700 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 SNRNP48Q6IEG0 339 aaKnown RBP15.3■□□□□ 0.04
USP44-202ENST00000393091 TRMT44Q8IYL2 757 aaKnown RBP15.3■□□□□ 0.04
USP44-202ENST00000393091 CRYGNQ8WXF5 182 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 TNFRSF25Q93038 417 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 AGBL1Q96MI9 1066 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 CCPG1Q9ULG6 757 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 PAXIP1Q6ZW49 1069 aaPredicted RBP15.3■□□□□ 0.04
USP44-202ENST00000393091 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 ERO1AQ96HE7 468 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 RAVER2Q9HCJ3 691 aaKnown RBP15.3■□□□□ 0.04
USP44-202ENST00000393091 RIPK3Q9Y572 518 aa15.3■□□□□ 0.04
USP44-202ENST00000393091 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 TRERF1Q96PN7 1200 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 SLC26A6Q9BXS9 759 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 CPVLQ9H3G5 476 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
USP44-202ENST00000393091 CALML3P27482 149 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 SP3Q02447 781 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 STK3Q13188 491 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 AP3B2Q13367 1082 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 ZNF792Q3KQV3 632 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 TYW1BQ6NUM6 668 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 MAMDC4Q6UXC1 1216 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 PHKBQ93100 1093 aa15.29■□□□□ 0.04
USP44-202ENST00000393091 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
USP44-202ENST00000393091 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
USP44-202ENST00000393091 MEIS2O14770 477 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 FKTNO75072 461 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 OLFML2BQ68BL8 750 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 XRRA1Q6P2D8 792 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 CYP39A1Q9NYL5 469 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 NRBP1Q9UHY1 535 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 ERCC3P19447 782 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 EDNRBP24530 442 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 CTGFP29279 349 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 GPR142Q7Z601 462 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
USP44-202ENST00000393091 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 RAB11FIP4Q86YS3 637 aa15.28■□□□□ 0.04
USP44-202ENST00000393091 JAK2O60674 1132 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 FOSP01100 380 aaPredicted RBP15.27■□□□□ 0.04
USP44-202ENST00000393091 MMP1P03956 469 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 GNA11P29992 359 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 FCGRTP55899 365 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 AKAP17AQ02040 695 aaKnown RBP15.27■□□□□ 0.04
USP44-202ENST00000393091 IKQ13123 557 aaPredicted RBP15.27■□□□□ 0.04
USP44-202ENST00000393091 CMTR1Q8N1G2 835 aaKnown RBP15.27■□□□□ 0.04
USP44-202ENST00000393091 FBXO18Q8NFZ0 1043 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 FGD4Q96M96 766 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 CPA4Q9UI42 421 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 PCDHA4Q9UN74 947 aa15.27■□□□□ 0.04
USP44-202ENST00000393091 XBP1P17861 261 aa15.27■□□□□ 0.03
USP44-202ENST00000393091 PDCP20941 246 aa15.27■□□□□ 0.03
USP44-202ENST00000393091 U2AF2P26368 475 aaKnown RBP eCLIP15.27■□□□□ 0.03
USP44-202ENST00000393091 PORCNQ9H237 461 aa15.27■□□□□ 0.03
USP44-202ENST00000393091 CYP3A4P08684 503 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 CUL5Q93034 780 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 IWS1Q96ST2 819 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 FOXP1Q9H334 677 aaPredicted RBP15.26■□□□□ 0.03
USP44-202ENST00000393091 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 ORC2Q13416 577 aaPredicted RBP15.26■□□□□ 0.03
USP44-202ENST00000393091 CCDC174Q6PII3 467 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 C6orf50Q9HD87 102 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
USP44-202ENST00000393091 PRDM10Q9NQV6 1147 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 SYNGAP1Q96PV0 1343 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
USP44-202ENST00000393091 RAD21O60216 631 aa15.26■□□□□ 0.03
USP44-202ENST00000393091 STAM2O75886 525 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms