RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 FAM151AQ8WW52 585 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 GMCL1Q96IK5 515 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 PYCARDQ9ULZ3 195 aa22.71■■□□□ 1.23
PTPN11-202ENST00000392597 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
PTPN11-202ENST00000392597 PPP1R11O60927 126 aaPredicted RBP22.7■■□□□ 1.22
PTPN11-202ENST00000392597 UBA7P41226 1012 aa22.7■■□□□ 1.22
PTPN11-202ENST00000392597 MRPL12P52815 198 aaKnown RBP22.7■■□□□ 1.22
PTPN11-202ENST00000392597 CUL5Q93034 780 aa22.7■■□□□ 1.22
PTPN11-202ENST00000392597 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
PTPN11-202ENST00000392597 MYL1P05976 194 aa22.69■■□□□ 1.22
PTPN11-202ENST00000392597 STAT6P42226 847 aa22.69■■□□□ 1.22
PTPN11-202ENST00000392597 CLK2P49760 499 aaKnown RBP22.69■■□□□ 1.22
PTPN11-202ENST00000392597 SEMA3FQ13275 785 aa22.69■■□□□ 1.22
PTPN11-202ENST00000392597 SPDYE2Q495Y8 402 aa22.69■■□□□ 1.22
PTPN11-202ENST00000392597 CACTINQ8WUQ7 758 aaKnown RBP22.69■■□□□ 1.22
PTPN11-202ENST00000392597 CUEDC2Q9H467 287 aa22.69■■□□□ 1.22
PTPN11-202ENST00000392597 MAGEF1Q9HAY2 307 aa22.69■■□□□ 1.22
PTPN11-202ENST00000392597 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 ATP1A3P13637 1013 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 SLC16A2P36021 539 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 SHROOM1Q2M3G4 852 aaPredicted RBP22.68■■□□□ 1.22
PTPN11-202ENST00000392597 LRRC8AQ8IWT6 810 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 FANCLQ9NW38 375 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 GDF11O95390 407 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 FMR1Q06787 632 aaKnown RBP eCLIP22.68■■□□□ 1.224e-7■■□□□ 14.1
PTPN11-202ENST00000392597 RMND1Q9NWS8 449 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 TMEM260Q9NX78 707 aa22.68■■□□□ 1.22
PTPN11-202ENST00000392597 F5H6K3 240 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 GH2P01242 217 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 ZNF18P17022 549 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 KLRC3Q07444 240 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 LRMPQ12912 555 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 KARSQ15046 597 aaKnown RBP22.67■■□□□ 1.22
PTPN11-202ENST00000392597 RRAGBQ5VZM2 374 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 MTRQ99707 1265 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.67■■□□□ 1.22
PTPN11-202ENST00000392597 NFE2L3Q9Y4A8 694 aa22.67■■□□□ 1.22
PTPN11-202ENST00000392597 TCP10L2B9ZVM9 353 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 SERPINC1P01008 464 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 MMP14P50281 582 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 UBASH3AP57075 661 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 CUL4BQ13620 913 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 QRICH1Q2TAL8 776 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 NAALADL2Q58DX5 795 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 PPP4R3AQ6IN85 833 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 FILIP1Q7Z7B0 1213 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 MTMR9Q96QG7 549 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 PSTPIP2Q9H939 334 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 CNTNAP1P78357 1384 aa22.66■■□□□ 1.22
PTPN11-202ENST00000392597 FZD9O00144 591 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 NDUFB10O96000 172 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 CDC25AP30304 524 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 TERF1P54274 439 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 FAM83AQ86UY5 434 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 IGSF22Q8N9C0 903 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 CCDC150Q8NCX0 1101 aa22.65■■□□□ 1.22
PTPN11-202ENST00000392597 NAP1L4Q99733 375 aaKnown RBP22.65■■□□□ 1.22
PTPN11-202ENST00000392597 CLRN2A0PK11 232 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 TBC1D12O60347 775 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 CASP1P29466 404 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 CDC37Q16543 378 aaPredicted RBP22.64■■□□□ 1.22
PTPN11-202ENST00000392597 MCTP2Q6DN12 878 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 CABP7Q86V35 215 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 RASSF8Q8NHQ8 419 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 KBTBD4Q9NVX7 518 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 RNF181Q9P0P0 153 aa22.64■■□□□ 1.22
PTPN11-202ENST00000392597 ZBTB12Q9Y330 459 aaPredicted RBP22.64■■□□□ 1.22
PTPN11-202ENST00000392597 PP2D1A8MPX8 630 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 PPP1R3GB7ZBB8 358 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 GCFC2P16383 781 aaKnown RBP22.64■■□□□ 1.21
PTPN11-202ENST00000392597 FXR2P51116 673 aaKnown RBP eCLIP22.64■■□□□ 1.212e-9■■■■□ 19.4
PTPN11-202ENST00000392597 CALCRLQ16602 461 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 SPATA1Q5VX52 437 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 BTNL9Q6UXG8 535 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 POTEDQ86YR6 584 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 ZBED3Q96IU2 234 aaPredicted RBP22.64■■□□□ 1.21
PTPN11-202ENST00000392597 MED15Q96RN5 788 aa22.64■■□□□ 1.21
PTPN11-202ENST00000392597 RAD21O60216 631 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 RPN1P04843 607 aaKnown RBP22.63■■□□□ 1.21
PTPN11-202ENST00000392597 JAG1P78504 1218 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 CXCL9Q07325 125 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 RRP1BQ14684 758 aaKnown RBP22.63■■□□□ 1.21
PTPN11-202ENST00000392597 C9orf131Q5VYM1 1079 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 TMC6Q7Z403 805 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 STAMQ92783 540 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 BLZF1Q9H2G9 400 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 ARHGEF10LQ9HCE6 1279 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 SYNRGQ9UMZ2 1314 aa22.63■■□□□ 1.21
PTPN11-202ENST00000392597 EDIL3O43854 480 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 BMP3P12645 472 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 TNNI2P48788 182 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 KCNB1Q14721 858 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 TMEM266Q2M3C6 531 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 ZNF658Q5TYW1 1059 aaPredicted RBP22.62■■□□□ 1.21
PTPN11-202ENST00000392597 C17orf53Q8N3J3 647 aaPredicted RBP22.62■■□□□ 1.21
PTPN11-202ENST00000392597 RAB34Q9BZG1 259 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 PCDHA1Q9Y5I3 950 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
PTPN11-202ENST00000392597 CD44P16070 742 aaKnown RBP22.62■■□□□ 1.21
PTPN11-202ENST00000392597 PDIA5Q14554 519 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms