RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR52Z1P0C646 297 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 FBXO11Q86XK2 927 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 DPCR1Q3MIW9 517 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 DHX58Q96C10 678 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 TRIM44Q96DX7 344 aaPredicted RBP12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
SMARCAL1-203ENST00000392128 A0A087WWV3 80 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 ADCY5O95622 1261 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 TXLNAP40222 546 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 TRAF1Q13077 416 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 E2F4Q16254 413 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 UBE2SQ16763 222 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 DCAF15Q66K64 600 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 MCTP2Q6DN12 878 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 TEX2Q8IWB9 1127 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 CHURC1Q8WUH1 139 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 SYT17Q9BSW7 474 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 PCDHA5Q9Y5H7 936 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 FOXN1O15353 648 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 EDIL3O43854 480 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 PPP4R3AQ6IN85 833 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 DHX40Q8IX18 779 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 IQUBQ8NA54 791 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 AK8Q96MA6 479 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 GLIS2Q9BZE0 524 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
SMARCAL1-203ENST00000392128 BIN1O00499 593 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 AP5Z1O43299 807 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 SARSP49591 514 aaKnown RBP12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 AP3B2Q13367 1082 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 HS1BP3Q53T59 392 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 SPATA20Q8TB22 786 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 ZNF341Q9BYN7 854 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 FEM1BQ9UK73 627 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 MEIS2O14770 477 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 SNAP25P60880 206 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 ZNF112Q9UJU3 913 aa12.97□□□□□ -0.33
SMARCAL1-203ENST00000392128 BECN2A8MW95 431 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 GCFC2P16383 781 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 LPAR1Q92633 364 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 PAGE5Q96GU1 130 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 FEZ1Q99689 392 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
SMARCAL1-203ENST00000392128 USP17L15C9J2P7 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L11C9JVI0 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L18D6R9N7 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L22D6RA61 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L19D6RCP7 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L20D6RJB6 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 TDP2O95551 362 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 EPS15P42566 896 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 PDE4CQ08493 712 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L24Q0WX57 530 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 ZYXQ15942 572 aaKnown RBP12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 CALCRLQ16602 461 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USH1GQ495M9 461 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 PDXDC2PQ6P474 469 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP17L6PQ6QN14 398 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 GRAMD1CQ8IYS0 662 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 ANO3Q9BYT9 981 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 GGA3Q9NZ52 723 aa12.96□□□□□ -0.34
SMARCAL1-203ENST00000392128 POLR2AP24928 1970 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 PITPNM2Q9BZ72 1349 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 WDR46O15213 610 aaKnown RBP12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 SLC37A4O43826 429 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 SMC2O95347 1197 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 USP11P51784 963 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 HIRAP54198 1017 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 DISC1Q9NRI5 854 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 MAN1B1Q9UKM7 699 aa12.95□□□□□ -0.34
SMARCAL1-203ENST00000392128 PIK3CDO00329 1044 aa12.94□□□□□ -0.34
SMARCAL1-203ENST00000392128 OPLAHO14841 1288 aa12.94□□□□□ -0.34
SMARCAL1-203ENST00000392128 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
SMARCAL1-203ENST00000392128 YBX3P16989 372 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCAL1-203ENST00000392128 INPP5BP32019 993 aa12.94□□□□□ -0.34
SMARCAL1-203ENST00000392128 UBA7P41226 1012 aa12.94□□□□□ -0.34
SMARCAL1-203ENST00000392128 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.348e-6■■■■□ 21.8
SMARCAL1-203ENST00000392128 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms