RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 SLC28A3Q9HAS3 691 aa11.42□□□□□ -0.58
TPM3P6-201ENST00000391998 A1CFQ9NQ94 594 aaKnown RBP11.42□□□□□ -0.58
TPM3P6-201ENST00000391998 RNF146Q9NTX7 359 aa11.42□□□□□ -0.58
TPM3P6-201ENST00000391998 TCP11L1Q9NUJ3 509 aa11.42□□□□□ -0.58
TPM3P6-201ENST00000391998 ANAPC4Q9UJX5 808 aa11.42□□□□□ -0.58
TPM3P6-201ENST00000391998 FGRP09769 529 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 ACTN1P12814 892 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 CSF2RAP15509 400 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 MRPS5P82675 430 aaKnown RBP11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 ALX1Q15699 326 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 DUSP28Q4G0W2 176 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 ZNF365Q70YC5 407 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 MIER1Q8N108 512 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 DNERQ8NFT8 737 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 CYP39A1Q9NYL5 469 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 STX8Q9UNK0 236 aa11.41□□□□□ -0.58
TPM3P6-201ENST00000391998 CDK5RAP2Q96SN8 1893 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 ORC4O43929 436 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 SLC4A3P48751 1232 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 AAMPQ13685 434 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 SLFNL1Q499Z3 407 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 EVI5LQ96CN4 794 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 FGD4Q96M96 766 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 FSD1Q9BTV5 496 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 BCL11AQ9H165 835 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 HELLSQ9NRZ9 838 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 THEGQ9P2T0 379 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 PCDHA11Q9Y5I1 949 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 SLC4A7Q9Y6M7 1214 aa11.4□□□□□ -0.58
TPM3P6-201ENST00000391998 ZNF536O15090 1300 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 RBM47A0AV96 593 aaKnown RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 CTAGE5O15320 804 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 DYNC1LI2O43237 492 aaPredicted RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 PRDM1O75626 825 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 TOP1P11387 765 aaKnown RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 ALAS1P13196 640 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 MCCP23508 829 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 MFAP1P55081 439 aaKnown RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 CXCL17Q6UXB2 119 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 LRRC47Q8N1G4 583 aaKnown RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 NAV1Q8NEY1 1877 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 CCPG1Q9ULG6 757 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 PRR12Q9ULL5 1215 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 RLFQ13129 1914 aa11.39□□□□□ -0.59
TPM3P6-201ENST00000391998 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 WDR19Q8NEZ3 1342 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 MYADML2A6NDP7 307 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 SMIM22K7EJ46 135 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 SMPD1P17405 629 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 MX1P20591 662 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 CNTN2Q02246 1040 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 BFSP2Q13515 415 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 GPATCH4Q5T3I0 446 aaKnown RBP11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 TAPT1Q6NXT6 567 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 SCFD2Q8WU76 684 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 MTG1Q9BT17 334 aaPredicted RBP11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 NOC4LQ9BVI4 516 aaKnown RBP11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 ALDH8A1Q9H2A2 487 aaPredicted RBP11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 RNF41Q9H4P4 317 aaPredicted RBP11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 TTC28Q96AY4 2481 aa11.38□□□□□ -0.59
TPM3P6-201ENST00000391998 M0R2C6 588 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 RANBP6O60518 1105 aaKnown RBP11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 BAIAP3O94812 1187 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 RETREG2Q8NC44 543 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 PI4K2BQ8TCG2 481 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 C1QTNF1Q9BXJ1 281 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 CXXC1Q9P0U4 656 aaPredicted RBP11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 COG5Q9UP83 839 aa11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
TPM3P6-201ENST00000391998 UNC80Q8N2C7 3258 aa11.36□□□□□ -0.59
TPM3P6-201ENST00000391998 ADCY6O43306 1168 aa11.36□□□□□ -0.59
TPM3P6-201ENST00000391998 EFCAB14O75071 495 aa11.36□□□□□ -0.59
TPM3P6-201ENST00000391998 CHGBP05060 677 aa11.36□□□□□ -0.59
TPM3P6-201ENST00000391998 ATP2A2P16615 1042 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms