RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SPATA5Q8NB90 893 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 CDK5RAP3Q96JB5 506 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 POP1Q99575 1024 aaKnown RBP7.77□□□□□ -1.17
TRAV35-201ENST00000390462 HAUS7Q99871 368 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 IFT122Q9HBG6 1241 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 FNIP2Q9P278 1114 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 MRFAP1Q9Y605 127 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 TACC3Q9Y6A5 838 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 KIF13AQ9H1H9 1805 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 TARBP1Q13395 1621 aaKnown RBP7.77□□□□□ -1.17
TRAV35-201ENST00000390462 TOPBP1Q92547 1522 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 RPGRIP1LQ68CZ1 1315 aa7.77□□□□□ -1.17
TRAV35-201ENST00000390462 BLACEA4D250 179 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 CHURC1-FNTBB4DL54 471 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 hCG_1984214I3L0E3 225 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 FIBPO43427 364 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 TBX1O43435 398 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 DLX3O60479 287 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 SNX2O60749 519 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 POLR2BP30876 1174 aaKnown RBP7.76□□□□□ -1.17
TRAV35-201ENST00000390462 LSSP48449 732 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 TERF1P54274 439 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 EIF5P55010 431 aaKnown RBP7.76□□□□□ -1.17
TRAV35-201ENST00000390462 DSG1Q02413 1049 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 PDE4BQ07343 736 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 INPP5AQ14642 412 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 PDCD2Q16342 344 aaPredicted RBP7.76□□□□□ -1.17
TRAV35-201ENST00000390462 IFIT1BQ5T764 474 aaKnown RBP7.76□□□□□ -1.17
TRAV35-201ENST00000390462 DUSP27Q5VZP5 1158 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 MAMDC2Q7Z304 686 aaPredicted RBP7.76□□□□□ -1.17
TRAV35-201ENST00000390462 HDXQ7Z353 690 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 SRGAP1Q7Z6B7 1085 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 IL17REQ8NFR9 667 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 RNF217Q8TC41 542 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 CCT6BQ92526 530 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 FGD4Q96M96 766 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 MKS1Q9NXB0 559 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 SAMD15Q9P1V8 674 aa7.76□□□□□ -1.17
TRAV35-201ENST00000390462 LOC102724428A0A0B4J2F2 783 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 CBX4O00257 560 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 AP1G1O43747 822 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 GSTP1P09211 210 aaKnown RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 NRLP54845 237 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 SIK1P57059 783 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 ATP11AP98196 1134 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 PDE1CQ14123 709 aaPredicted RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 TUBB8Q3ZCM7 444 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 RRP12Q5JTH9 1297 aaKnown RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 TDRD10Q5VZ19 366 aaKnown RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 TTLL5Q6EMB2 1281 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 DHX32Q7L7V1 743 aaKnown RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 DDX53Q86TM3 631 aaKnown RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 BVESQ8NE79 360 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 DDX54Q8TDD1 881 aaKnown RBP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 GPBAR1Q8TDU6 330 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 PGBD4Q96DM1 585 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 SGCZQ96LD1 299 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 CCDC138Q96M89 665 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 TAAR9Q96RI9 348 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 KLHL25Q9H0H3 589 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 EMC7Q9NPA0 242 aa7.75□□□□□ -1.17
TRAV35-201ENST00000390462 AQRO60306 1485 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRAV35-201ENST00000390462 A6NNZ2 444 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 NOP56O00567 594 aaKnown RBP7.74□□□□□ -1.17
TRAV35-201ENST00000390462 TPP1O14773 563 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA12O60330 932 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 CRTAMO95727 393 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 ZBED1O96006 694 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 APPP05067 770 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 BMP2P12643 396 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 TM4SF4P48230 202 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 HTRA3P83110 453 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PLA2G4EQ3MJ16 856 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 C6orf118Q5T5N4 469 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PDXDC1Q6P996 788 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 LYSMD3Q7Z3D4 306 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 VN1R5Q7Z5H4 357 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 KRT77Q7Z794 578 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 SAPCD2Q86UD0 394 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 RASSF3Q86WH2 238 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 SLC41A1Q8IVJ1 513 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 TMEM192Q8IY95 271 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 ACSBG1Q96GR2 724 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 MRGPRX3Q96LB0 322 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 SLC6A18Q96N87 628 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 EIF2AK1Q9BQI3 630 aaKnown RBP7.74□□□□□ -1.17
TRAV35-201ENST00000390462 RNF38Q9H0F5 515 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA9Q9Y5G4 932 aaKnown RBP7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA8Q9Y5G5 932 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA7Q9Y5G6 932 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA6Q9Y5G7 932 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA3Q9Y5H0 932 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 PCDHGA2Q9Y5H1 932 aa7.74□□□□□ -1.17
TRAV35-201ENST00000390462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.73□□□□□ -1.17
TRAV35-201ENST00000390462 TLR5O60602 858 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms