RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ZBTB5O15062 677 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 E2F4Q16254 413 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 TRMT1LQ7Z2T5 733 aaKnown RBP11.51□□□□□ -0.57
LTN1-203ENST00000389195 NEK8Q86SG6 692 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 MICALL2Q8IY33 904 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 QSER1Q2KHR3 1735 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 NEMFO60524 1076 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 PEX10O60683 326 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 SERPINC1P01008 464 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 STAT3P40763 770 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 STAT6P42226 847 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
LTN1-203ENST00000389195 TMC6Q7Z403 805 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
LTN1-203ENST00000389195 NAT10Q9H0A0 1025 aaKnown RBP11.51□□□□□ -0.57
LTN1-203ENST00000389195 SH3GLB2Q9NR46 395 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 NFE2L3Q9Y4A8 694 aa11.51□□□□□ -0.57
LTN1-203ENST00000389195 TRIM49BA6NDI0 452 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 USP27XA6NNY8 438 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
LTN1-203ENST00000389195 GNA11P29992 359 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 UBA7P41226 1012 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 FANCCQ00597 558 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 ECM1Q16610 540 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 TSC1Q92574 1164 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 FERMT2Q96AC1 680 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 EHD4Q9H223 541 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 TRMT1Q9NXH9 659 aaKnown RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 HDAC9Q9UKV0 1011 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 R3HCC1Q9Y3T6 440 aaKnown RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 PLCG1P19174 1290 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 SARSP49591 514 aaKnown RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 CACNB1Q02641 598 aaPredicted RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 NBPF12Q5TAG4 269 aaPredicted RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 ZKSCAN4Q969J2 545 aaPredicted RBP11.5□□□□□ -0.57
LTN1-203ENST00000389195 LZTS2Q9BRK4 669 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
LTN1-203ENST00000389195 ZNF646O15015 1829 aaPredicted RBP11.49□□□□□ -0.57
LTN1-203ENST00000389195 INPP5BP32019 993 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 PTGER2P43116 358 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 DYMQ7RTS9 669 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 KCNK18Q7Z418 384 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 CCDC17Q96LX7 622 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
LTN1-203ENST00000389195 BCAS3Q9H6U6 928 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
LTN1-203ENST00000389195 CDK11BP21127 795 aaKnown RBP11.49□□□□□ -0.57
LTN1-203ENST00000389195 MORC3Q14149 939 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 ARHGAP27Q6ZUM4 889 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 GPIHBP1Q8IV16 184 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 SLC16A10Q8TF71 515 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
LTN1-203ENST00000389195 MRIQ9BWK5 157 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 INTS13Q9NVM9 706 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 ZBTB21Q9ULJ3 1066 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 PRR12Q9ULL5 1215 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 CTNND2Q9UQB3 1225 aa11.49□□□□□ -0.57
LTN1-203ENST00000389195 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 ENTPD3O75355 529 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 CFBP00751 764 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 OR52Z1P0C646 297 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 BMP3P12645 472 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 PMS1P54277 932 aaKnown RBP11.48□□□□□ -0.57
LTN1-203ENST00000389195 RRAGBQ5VZM2 374 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 CPXCR1Q8N123 301 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 IQUBQ8NA54 791 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 NYAP2Q9P242 653 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 MEIS2O14770 477 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 OPLAHO14841 1288 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 TEX33O43247 280 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 MARCH6O60337 910 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 FCER1AP12319 257 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 UBASH3AP57075 661 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 FKBP1AP62942 108 aaKnown RBP11.48□□□□□ -0.57
LTN1-203ENST00000389195 MYL5Q02045 173 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 NOLC1Q14978 699 aaKnown RBP eCLIP11.48□□□□□ -0.57
LTN1-203ENST00000389195 CALCRLQ16602 461 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 CPLX3Q8WVH0 158 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 DISC1Q9NRI5 854 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 PKD2L1Q9P0L9 805 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 HACL1Q9UJ83 578 aa11.48□□□□□ -0.57
LTN1-203ENST00000389195 SSBP05455 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
LTN1-203ENST00000389195 CCT6AP40227 531 aaKnown RBP11.47□□□□□ -0.57
LTN1-203ENST00000389195 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms