RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 FARP2O94887 1054 aaPredicted RBP18.79■□□□□ 0.6
SNRPB-201ENST00000381342 ALAS1P13196 640 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 COPB2P35606 906 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 QRICH1Q2TAL8 776 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 CMTR1Q8N1G2 835 aaKnown RBP18.79■□□□□ 0.6
SNRPB-201ENST00000381342 USP6NLQ92738 828 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 DPF3Q92784 378 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 LARP6Q9BRS8 491 aaKnown RBP18.79■□□□□ 0.6
SNRPB-201ENST00000381342 BACH2Q9BYV9 841 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 PAK6Q9NQU5 681 aaPredicted RBP18.79■□□□□ 0.6
SNRPB-201ENST00000381342 RNF146Q9NTX7 359 aa18.79■□□□□ 0.6
SNRPB-201ENST00000381342 CYTH3O43739 400 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 PRKAR2AP13861 404 aaKnown RBP18.78■□□□□ 0.6
SNRPB-201ENST00000381342 RBM25P49756 843 aaKnown RBP18.78■□□□□ 0.6
SNRPB-201ENST00000381342 GRB14Q14449 540 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 RTN1Q16799 776 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 HOMER1Q86YM7 354 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 FANCBQ8NB91 859 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 PIBF1Q8WXW3 757 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 SHISA4Q96DD7 197 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 NID2Q14112 1375 aa18.78■□□□□ 0.6
SNRPB-201ENST00000381342 PDE4DIPQ5VU43 2346 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 CENPFP49454 3210 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 FCER1AP12319 257 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 ADORA2AP29274 412 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 METAP2P50579 478 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNRPB-201ENST00000381342 TRIM32Q13049 653 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 USH1GQ495M9 461 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 MUM1L1Q5H9M0 696 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 TMTC3Q6ZXV5 915 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 SRBD1Q8N5C6 995 aaKnown RBP18.77■□□□□ 0.6
SNRPB-201ENST00000381342 MTMR8Q96EF0 704 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 MMP19Q99542 508 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 KIF2CQ99661 725 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 SPZ1Q9BXG8 430 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 RIOX1Q9H6W3 641 aa18.77■□□□□ 0.6
SNRPB-201ENST00000381342 CDC27P30260 824 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 GNAQP50148 359 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 RCAN1P53805 252 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 AK2P54819 239 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 CACNB2Q08289 660 aaPredicted RBP18.76■□□□□ 0.59
SNRPB-201ENST00000381342 CCL14Q16627 93 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 ABRAQ8N0Z2 381 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 ANKLE1Q8NAG6 615 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 CHST13Q8NET6 341 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 PIGSQ96S52 555 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 ACAD9Q9H845 621 aa18.76■□□□□ 0.59
SNRPB-201ENST00000381342 RBM28Q9NW13 759 aaKnown RBP18.76■□□□□ 0.59
SNRPB-201ENST00000381342 CNTNAP5Q8WYK1 1306 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 PPP1R11O60927 126 aaPredicted RBP18.75■□□□□ 0.59
SNRPB-201ENST00000381342 HOXC6P09630 235 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 NEK4P51957 841 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 EVCP57679 992 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 KCTD2Q14681 263 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 TKFCQ3LXA3 575 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 MAP3K21Q5TCX8 1036 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
SNRPB-201ENST00000381342 NECAB2Q7Z6G3 386 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 TBC1D32Q96NH3 1257 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 LZTS2Q9BRK4 669 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 CRISPLD2Q9H0B8 497 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 FAM217BQ9NTX9 383 aaPredicted RBP18.75■□□□□ 0.59
SNRPB-201ENST00000381342 FBXO40Q9UH90 709 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 NR2E3Q9Y5X4 410 aa18.75■□□□□ 0.59
SNRPB-201ENST00000381342 NFIBO00712 420 aa18.74■□□□□ 0.59
SNRPB-201ENST00000381342 ZBTB5O15062 677 aa18.74■□□□□ 0.59
SNRPB-201ENST00000381342 PGK2P07205 417 aa18.74■□□□□ 0.59
SNRPB-201ENST00000381342 CNGA1P29973 690 aa18.74■□□□□ 0.59
SNRPB-201ENST00000381342 PDIA3P30101 505 aaKnown RBP18.74■□□□□ 0.59
SNRPB-201ENST00000381342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■□□□ 12.2
SNRPB-201ENST00000381342 FBXO11Q86XK2 927 aa18.74■□□□□ 0.59
SNRPB-201ENST00000381342 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
SNRPB-201ENST00000381342 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 COBLO75128 1261 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 ADD1P35611 737 aaKnown RBP18.73■□□□□ 0.59
SNRPB-201ENST00000381342 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
SNRPB-201ENST00000381342 STK3Q13188 491 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 ANKRD35Q8N283 1001 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 NPLOC4Q8TAT6 608 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 RRP36Q96EU6 259 aaKnown RBP18.73■□□□□ 0.59
SNRPB-201ENST00000381342 AMNQ9BXJ7 453 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
SNRPB-201ENST00000381342 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
SNRPB-201ENST00000381342 LRRC37A2A6NM11 1700 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 MCM3APO60318 1980 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 ABCB11O95342 1321 aa18.73■□□□□ 0.59
SNRPB-201ENST00000381342 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 MSCO60682 206 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 SMARCA1P28370 1054 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 FUT2Q10981 343 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 OLFML2BQ68BL8 750 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 NSMFQ6X4W1 530 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 PAWRQ96IZ0 340 aaKnown RBP18.72■□□□□ 0.59
SNRPB-201ENST00000381342 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 TPCN1Q9ULQ1 816 aa18.72■□□□□ 0.59
SNRPB-201ENST00000381342 LARGE1O95461 756 aa18.71■□□□□ 0.59
SNRPB-201ENST00000381342 CCND3P30281 292 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms