RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 KIF5AQ12840 1032 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 VSTM4Q8IW00 320 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 TPH2Q8IWU9 490 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 PPP1R13BQ96KQ4 1090 aa13.97□□□□□ -0.17
CDX2-201ENST00000381020 TEX33O43247 280 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 RHOXF2BP0C7M4 288 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 ATP2C1P98194 919 aaPredicted RBP13.96□□□□□ -0.17
CDX2-201ENST00000381020 TRAF1Q13077 416 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 GPBP1Q86WP2 473 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 COL23A1Q86Y22 540 aaPredicted RBP13.96□□□□□ -0.17
CDX2-201ENST00000381020 MAP3K14Q99558 947 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.96□□□□□ -0.17
CDX2-201ENST00000381020 AMNQ9BXJ7 453 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 DNM3Q9UQ16 869 aa13.96□□□□□ -0.17
CDX2-201ENST00000381020 MEIS1O00470 390 aa13.96□□□□□ -0.18
CDX2-201ENST00000381020 MYCLP12524 364 aaPredicted RBP13.96□□□□□ -0.18
CDX2-201ENST00000381020 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.18
CDX2-201ENST00000381020 KMT5BQ4FZB7 885 aa13.96□□□□□ -0.18
CDX2-201ENST00000381020 ARL6IP4Q66PJ3 421 aaKnown RBP13.96□□□□□ -0.18
CDX2-201ENST00000381020 HAUS3Q68CZ6 603 aa13.96□□□□□ -0.18
CDX2-201ENST00000381020 GPR75-ASB3A0A0A6YYF3 556 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 ERICH4A6NGS2 130 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 B4DLN1 442 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 H7C1D1 291 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 TDP2O95551 362 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 TERF1P54274 439 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 NFIAQ12857 509 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 NAA30Q147X3 362 aaPredicted RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 PKN1Q16512 942 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 TMEM60Q9H2L4 133 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 LRRC37A3O60309 1634 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 DDR1Q08345 913 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDX2-201ENST00000381020 PSMB7Q99436 277 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 MTMR4Q9NYA4 1195 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 AFDNP55196 1824 aaKnown RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 KRT86O43790 486 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 ZNF658Q5TYW1 1059 aaPredicted RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 TAF4BQ92750 862 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 ACBD3Q9H3P7 528 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 ZNF277Q9NRM2 450 aaPredicted RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 RAPGEF1Q13905 1077 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 TMTC1Q8IUR5 882 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 ERO1AQ96HE7 468 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 GLT8D2Q9H1C3 349 aa13.95□□□□□ -0.18
CDX2-201ENST00000381020 DHX36Q9H2U1 1008 aaKnown RBP13.95□□□□□ -0.18
CDX2-201ENST00000381020 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 SOWAHDA6NJG2 315 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 TMCO5BA8MYB1 307 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 BMP3P12645 472 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 PRCPP42785 496 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 ARMCX5Q6P1M9 558 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
CDX2-201ENST00000381020 HPS3Q969F9 1004 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 GJA10Q969M2 543 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 TUBGCP2Q9BSJ2 902 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 IL17RBQ9NRM6 502 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 CTAGE15A4D2H0 777 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 CTAGE8P0CG41 777 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 KRT83P78385 493 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 CTAGE6Q86UF2 777 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 CTAGE4Q8IX94 777 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 TUBE1Q9UJT0 475 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
CDX2-201ENST00000381020 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
CDX2-201ENST00000381020 ALAS1P13196 640 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 KRT31Q15323 416 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 RTFDC1Q9BY42 306 aaPredicted RBP13.94□□□□□ -0.18
CDX2-201ENST00000381020 SH3GLB2Q9NR46 395 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
CDX2-201ENST00000381020 PAFAH1B1P43034 410 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 PPP4CP60510 307 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 VPS36Q86VN1 386 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 FOXP4Q8IVH2 680 aaPredicted RBP13.93□□□□□ -0.18
CDX2-201ENST00000381020 TXLNBQ8N3L3 684 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 TTLL6Q8N841 843 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 SH2D4AQ9H788 454 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 CETN3O15182 167 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 FAM26FQ5R3K3 315 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 TYW1BQ6NUM6 668 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 C16orf86Q6ZW13 317 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms