RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 RILPQ96NA2 401 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 CACYBPQ9HB71 228 aaKnown RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 TSKSQ9UJT2 592 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 SLC1A4P43007 532 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 UBXN2AP68543 259 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 ITGB3BPQ13352 177 aaPredicted RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 DCUN1D2Q6PH85 259 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 CCDC125Q86Z20 511 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 POMGNT1Q8WZA1 660 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 CLRN2A0PK11 232 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 YY1P25490 414 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 ZBTB33Q86T24 672 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 SIX5Q8N196 739 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 RFWD2Q8NHY2 731 aa11.76□□□□□ -0.53
CLCN4-202ENST00000380833 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
CLCN4-202ENST00000380833 SPTLC2O15270 562 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 IL1RL1Q01638 556 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 ANKRD42Q8N9B4 389 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 GANCQ8TET4 914 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
CLCN4-202ENST00000380833 ZNF148Q9UQR1 794 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 THRAP3Q9Y2W1 955 aaKnown RBP11.75□□□□□ -0.53
CLCN4-202ENST00000380833 GNA11P29992 359 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 A0A1B0GW55 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 H0YC42 278 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 A1BGP04217 495 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4L2P0CJ85 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4L3P0CJ86 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4L4P0CJ87 422 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4L5P0CJ88 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4L6P0CJ89 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4L7P0CJ90 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 SLC20A2Q08357 652 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 STX3Q13277 289 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DUX4Q9UBX2 424 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 ATP11BQ9Y2G3 1177 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
CLCN4-202ENST00000380833 TADA3O75528 432 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 MCF2P10911 925 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DNM2P50570 870 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 TBC1D1Q86TI0 1168 aaPredicted RBP11.75□□□□□ -0.53
CLCN4-202ENST00000380833 SULF1Q8IWU6 871 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 STOML1Q9UBI4 398 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLCN4-202ENST00000380833 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
CLCN4-202ENST00000380833 CBX8Q9HC52 389 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 HFM1A2PYH4 1435 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 ABCC5O15440 1437 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 CASP2P42575 452 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 SNX29Q8TEQ0 813 aa11.75□□□□□ -0.53
CLCN4-202ENST00000380833 CCDC144BQ3MJ40 725 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 FAM186BQ8IYM0 893 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 SCYL3Q8IZE3 742 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 ZNF229Q9UJW7 825 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 Q4G0T1 1027 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 KIFAP3Q92845 792 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 SIKE1Q9BRV8 207 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 POLKQ9UBT6 870 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 CAPN9O14815 690 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 PDE5AO76074 875 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 MYL5Q02045 173 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
CLCN4-202ENST00000380833 RINLQ6ZS11 566 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 MRPL44Q9H9J2 332 aaKnown RBP11.74□□□□□ -0.53
CLCN4-202ENST00000380833 MOSPD1Q9UJG1 213 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 SLC12A1Q13621 1099 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 CEP55Q53EZ4 464 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 AFAP1L2Q8N4X5 818 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 TTLL11Q8NHH1 800 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 CASKIN1Q8WXD9 1431 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 PAPOLAP51003 745 aaKnown RBP11.74□□□□□ -0.53
CLCN4-202ENST00000380833 MECOMQ03112 1051 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 DRP2Q13474 957 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 KSR2Q6VAB6 950 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 THOC1Q96FV9 657 aaKnown RBP11.74□□□□□ -0.53
CLCN4-202ENST00000380833 BLZF1Q9H2G9 400 aa11.74□□□□□ -0.53
CLCN4-202ENST00000380833 PARP2Q9UGN5 583 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms