RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 KBTBD4Q9NVX7 518 aa26.07■■□□□ 1.76
VPS16-201ENST00000380443 BIN2Q9UBW5 565 aaPredicted RBP26.07■■□□□ 1.76
VPS16-201ENST00000380443 MYH4Q9Y623 1939 aa26.07■■□□□ 1.76
VPS16-201ENST00000380443 PPIP5K2O43314 1243 aa26.07■■□□□ 1.76
VPS16-201ENST00000380443 CDKAL1Q5VV42 579 aa26.07■■□□□ 1.76
VPS16-201ENST00000380443 MCTP2Q6DN12 878 aa26.07■■□□□ 1.76
VPS16-201ENST00000380443 CUL5Q93034 780 aa26.07■■□□□ 1.76
VPS16-201ENST00000380443 A0A1B0GTH6 734 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 DDTLA6NHG4 134 aaPredicted RBP26.06■■□□□ 1.76
VPS16-201ENST00000380443 CD44P16070 742 aaKnown RBP26.06■■□□□ 1.76
VPS16-201ENST00000380443 SPAG1Q07617 926 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 NR1I3Q14994 352 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 CCDC93Q567U6 631 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 JAKMIP3Q5VZ66 844 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 CABP7Q86V35 215 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 ZSCAN29Q8IWY8 852 aaPredicted RBP26.06■■□□□ 1.76
VPS16-201ENST00000380443 CCAR2Q8N163 923 aaKnown RBP26.06■■□□□ 1.76
VPS16-201ENST00000380443 PSMD1Q99460 953 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 RAB34Q9BZG1 259 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 SIPA1L1O43166 1804 aa26.06■■□□□ 1.76
VPS16-201ENST00000380443 TNNT1P13805 278 aa26.05■■□□□ 1.76
VPS16-201ENST00000380443 HOXA7P31268 230 aaPredicted RBP26.05■■□□□ 1.76
VPS16-201ENST00000380443 TBX2Q13207 712 aaPredicted RBP26.05■■□□□ 1.76
VPS16-201ENST00000380443 NAALADL2Q58DX5 795 aa26.05■■□□□ 1.76
VPS16-201ENST00000380443 SPECC1LQ69YQ0 1117 aa26.05■■□□□ 1.76
VPS16-201ENST00000380443 PPP4R3AQ6IN85 833 aa26.05■■□□□ 1.76
VPS16-201ENST00000380443 TRMT44Q8IYL2 757 aaKnown RBP26.05■■□□□ 1.76
VPS16-201ENST00000380443 CCDC47Q96A33 483 aaKnown RBP26.05■■□□□ 1.76
VPS16-201ENST00000380443 COA7Q96BR5 231 aa26.05■■□□□ 1.76
VPS16-201ENST00000380443 SAMSN1Q9NSI8 373 aaKnown RBP26.05■■□□□ 1.76
VPS16-201ENST00000380443 ZNF219Q9P2Y4 722 aaPredicted RBP26.05■■□□□ 1.76
VPS16-201ENST00000380443 PPP1R2P41236 205 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 CLK2P49760 499 aaKnown RBP26.04■■□□□ 1.76
VPS16-201ENST00000380443 FXR2P51116 673 aaKnown RBP eCLIP26.04■■□□□ 1.76
VPS16-201ENST00000380443 AMPD3Q01432 767 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 ATP2B2Q01814 1243 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 TCP10Q12799 353 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 PDIA5Q14554 519 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 FILIP1LQ4L180 1135 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 SH3BP5LQ7L8J4 393 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 FCHSD1Q86WN1 690 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 IGSF22Q8N9C0 903 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 MTMR9Q96QG7 549 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 BLZF1Q9H2G9 400 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 TMX1Q9H3N1 280 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 PSME4Q14997 1843 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 EEF2P13639 858 aaKnown RBP26.04■■□□□ 1.76
VPS16-201ENST00000380443 CASP1P29466 404 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 TMEM266Q2M3C6 531 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 GMCL1P1Q8NEA9 526 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 INTS13Q9NVM9 706 aa26.04■■□□□ 1.76
VPS16-201ENST00000380443 GCFC2P16383 781 aaKnown RBP26.03■■□□□ 1.76
VPS16-201ENST00000380443 PAK1Q13153 545 aa26.03■■□□□ 1.76
VPS16-201ENST00000380443 PTPN14Q15678 1187 aa26.03■■□□□ 1.76
VPS16-201ENST00000380443 CLEC10AQ8IUN9 316 aa26.03■■□□□ 1.76
VPS16-201ENST00000380443 CALML4Q96GE6 196 aa26.03■■□□□ 1.76
VPS16-201ENST00000380443 TMOD2Q9NZR1 351 aa26.03■■□□□ 1.76
VPS16-201ENST00000380443 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.03■■□□□ 1.76
VPS16-201ENST00000380443 STIM1Q13586 685 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 CALCRLQ16602 461 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 SLFN13Q68D06 897 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 KLHL10Q6JEL2 608 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 NYAP1Q6ZVC0 841 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 TEX2Q8IWB9 1127 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 STAMQ92783 540 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 HERC5Q9UII4 1024 aaKnown RBP26.02■■□□□ 1.76
VPS16-201ENST00000380443 UTRNP46939 3433 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 SLC1A4P43007 532 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 ABCB5Q2M3G0 1257 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 ANKRD20A12PQ8NF67 263 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 GMCL1Q96IK5 515 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 C16orf45Q96MC5 204 aaPredicted RBP26.02■■□□□ 1.76
VPS16-201ENST00000380443 HDAC9Q9UKV0 1011 aa26.02■■□□□ 1.76
VPS16-201ENST00000380443 ARFGEF1Q9Y6D6 1849 aa26.01■■□□□ 1.76
VPS16-201ENST00000380443 LRRC10BA6NIK2 292 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 RHOBTB3O94955 611 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 CDC25AP30304 524 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 CACNB3P54284 484 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 TTBK2Q6IQ55 1244 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 C7orf25Q9BPX7 421 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 TMEM260Q9NX78 707 aa26.01■■□□□ 1.75
VPS16-201ENST00000380443 TMEM232C9JQI7 657 aa26■■□□□ 1.75
VPS16-201ENST00000380443 H7C1D1 291 aa26■■□□□ 1.75
VPS16-201ENST00000380443 SLC26A4O43511 780 aa26■■□□□ 1.75
VPS16-201ENST00000380443 C21orf2O43822 256 aa26■■□□□ 1.75
VPS16-201ENST00000380443 ICA1Q05084 483 aa26■■□□□ 1.75
VPS16-201ENST00000380443 RSBN1LQ6PCB5 846 aaPredicted RBP26■■□□□ 1.75
VPS16-201ENST00000380443 TDRD3Q9H7E2 651 aaKnown RBP26■■□□□ 1.75
VPS16-201ENST00000380443 PSTPIP2Q9H939 334 aa26■■□□□ 1.75
VPS16-201ENST00000380443 STK17AQ9UEE5 414 aa26■■□□□ 1.75
VPS16-201ENST00000380443 LIMA1Q9UHB6 759 aaKnown RBP26■■□□□ 1.75
VPS16-201ENST00000380443 CTNND2Q9UQB3 1225 aa26■■□□□ 1.75
VPS16-201ENST00000380443 PCDHAC2Q9Y5I4 1007 aa26■■□□□ 1.75
VPS16-201ENST00000380443 YDJCA8MPS7 323 aa26■■□□□ 1.75
VPS16-201ENST00000380443 USP17L10C9JJH3 530 aa26■■□□□ 1.75
VPS16-201ENST00000380443 RBM26Q5T8P6 1007 aaKnown RBP26■■□□□ 1.75
VPS16-201ENST00000380443 CEP135Q66GS9 1140 aa26■■□□□ 1.75
VPS16-201ENST00000380443 KCTD1Q719H9 257 aa26■■□□□ 1.75
VPS16-201ENST00000380443 APTXQ7Z2E3 356 aaKnown RBP26■■□□□ 1.75
VPS16-201ENST00000380443 PP2D1A8MPX8 630 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms