RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 KRT71Q3SY84 523 aa12.23□□□□□ -0.45
PTCHD1-201ENST00000379361 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 MAP3K5Q99683 1374 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 MROH5Q6ZUA9 1318 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 ANKRD42Q8N9B4 389 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 PPWD1Q96BP3 646 aaKnown RBP12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 PDE8AO60658 829 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 XKR9Q5GH70 373 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 ABCC1P33527 1531 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 CEP85Q6P2H3 762 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 BAG6P46379 1132 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 SPATA17Q96L03 361 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 POLR2DO15514 142 aaKnown RBP12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 CHEK2O96017 543 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 EPHB1P54762 984 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 PDE1BQ01064 536 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 ODR4Q5SWX8 454 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 TTC30BQ8N4P2 665 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 MCF2LO15068 1137 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 TMCO5AQ8N6Q1 288 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 NRBP2Q9NSY0 501 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 TRIM55Q9BYV6 548 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 DEUP1Q05D60 604 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 RAB42Q8N4Z0 105 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 FAM81BQ96LP2 452 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 FANCAO15360 1455 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 EEF1B2P24534 225 aaKnown RBP12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 TMTC1Q8IUR5 882 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 TNRQ92752 1358 aa12.22□□□□□ -0.45
PTCHD1-201ENST00000379361 H7C0C1 242 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 ATP5OP48047 213 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 KCTD2Q14681 263 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 TSC1Q92574 1164 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 OTUB1Q96FW1 271 aaPredicted RBP12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 KIF17Q9P2E2 1029 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 SNRNP200O75643 2136 aaKnown RBP12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 MLKLQ8NB16 471 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 MTBPQ96DY7 904 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 PAMP19021 973 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 CIITAP33076 1130 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 STX19Q8N4C7 294 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 CFAP61Q8NHU2 1237 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 HIP1RO75146 1068 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 LRRIQ4A6NIV6 560 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 EEF1DP29692 281 aaKnown RBP12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 MYSM1Q5VVJ2 828 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.45
PTCHD1-201ENST00000379361 E9PMD0 336 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 MED7O43513 233 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 SLC8A1P32418 973 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 OGFRQ9NZT2 677 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 ACTN1P12814 892 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 GALNT17Q6IS24 598 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 SUGT1Q9Y2Z0 365 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 UBXN8O00124 270 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 NUDT18Q6ZVK8 323 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 PTPRZ1P23471 2315 aaPredicted RBP12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 ATICP31939 592 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 BZW1Q7L1Q6 419 aaKnown RBP12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 FAM149B1Q96BN6 582 aa12.21□□□□□ -0.46
PTCHD1-201ENST00000379361 GLE1Q53GS7 698 aaKnown RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 RNF207Q6ZRF8 634 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 TRIM58Q8NG06 486 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 TADA2BQ86TJ2 420 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 SMCO2A6NFE2 343 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 BRD1O95696 1058 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 GTPBP10A4D1E9 387 aaKnown RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 CPP00450 1065 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 SNX1Q13596 522 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 GIPC2Q8TF65 315 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 NUDCD1Q96RS6 583 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 B4E1Z4 1266 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 KRIT1O00522 736 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 ARHGDIAP52565 204 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 PRKG1Q13976 671 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 TRIM11Q96F44 468 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DPYSL4O14531 572 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 TRIM68Q6AZZ1 485 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms