RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MUM1L1Q5H9M0 696 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 RAET1EQ8TD07 263 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 PXYLP1Q8TE99 480 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 RRP36Q96EU6 259 aaKnown RBP21.73■■□□□ 1.07
SSU72-203ENST00000378725 HOMER2Q9NSB8 354 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 ABCB11O95342 1321 aa21.73■■□□□ 1.07
SSU72-203ENST00000378725 DNAJC25-GNG10A0A024R161 153 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 COBLO75128 1261 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 CYP2B6P20813 491 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 TRAF1Q13077 416 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 HOMER1Q86YM7 354 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 CCDC82Q8N4S0 544 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 MAF1Q9H063 256 aa21.72■■□□□ 1.07
SSU72-203ENST00000378725 ADCY3O60266 1144 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 CCT2P78371 535 aaKnown RBP21.71■■□□□ 1.07
SSU72-203ENST00000378725 NTRK3Q16288 839 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 USH1GQ495M9 461 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 DPP9Q86TI2 863 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 RGS22Q8NE09 1264 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 APBA2Q99767 749 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 DIS3Q9Y2L1 958 aaKnown RBP21.71■■□□□ 1.07
SSU72-203ENST00000378725 MRPL11Q9Y3B7 192 aaKnown RBP21.71■■□□□ 1.07
SSU72-203ENST00000378725 CNTNAP5Q8WYK1 1306 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 PLXNB2O15031 1838 aa21.71■■□□□ 1.07
SSU72-203ENST00000378725 PFKFB2O60825 505 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 IGHA2P01877 340 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 ZNF792Q3KQV3 632 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 TRMT44Q8IYL2 757 aaKnown RBP21.7■■□□□ 1.06
SSU72-203ENST00000378725 ANKRD35Q8N283 1001 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 SLAIN1Q8ND83 568 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 NPLOC4Q8TAT6 608 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 DDX11Q96FC9 970 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 A1CFQ9NQ94 594 aaKnown RBP21.7■■□□□ 1.06
SSU72-203ENST00000378725 SLC5A4Q9NY91 659 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 PCDHA1Q9Y5I3 950 aa21.7■■□□□ 1.06
SSU72-203ENST00000378725 NFIBO00712 420 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 PGK2P07205 417 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 IFNAR1P17181 557 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 GRK4P32298 578 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 PIBF1Q8WXW3 757 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 SLKQ9H2G2 1235 aaPredicted RBP21.69■■□□□ 1.06
SSU72-203ENST00000378725 NCOA5Q9HCD5 579 aaKnown RBP21.69■■□□□ 1.06
SSU72-203ENST00000378725 CYP39A1Q9NYL5 469 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 SEC63Q9UGP8 760 aaKnown RBP21.69■■□□□ 1.06
SSU72-203ENST00000378725 V9GY48 417 aaPredicted RBP21.69■■□□□ 1.06
SSU72-203ENST00000378725 PFASO15067 1338 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 ZNF236Q9UL36 1845 aa21.69■■□□□ 1.06
SSU72-203ENST00000378725 SCRN1Q12765 414 aa21.68■■□□□ 1.06
SSU72-203ENST00000378725 STK3Q13188 491 aa21.68■■□□□ 1.06
SSU72-203ENST00000378725 ME3Q16798 604 aa21.68■■□□□ 1.06
SSU72-203ENST00000378725 LIMCH1Q9UPQ0 1083 aa21.68■■□□□ 1.06
SSU72-203ENST00000378725 DOCK3Q8IZD9 2030 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 OPLAHO14841 1288 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 PRPF3O43395 683 aaKnown RBP21.67■■□□□ 1.06
SSU72-203ENST00000378725 CCL14Q16627 93 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 OLFML2BQ68BL8 750 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 MCF2L2Q86YR7 1114 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 SAMD3Q8N6K7 520 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 FAM133AQ8N9E0 248 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 TRIB2Q92519 343 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 ARMC5Q96C12 935 aa21.67■■□□□ 1.06
SSU72-203ENST00000378725 hCG_1642624A0A1W2PR95 340 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 ELNP15502 786 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 GHRHRQ02643 423 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 BAATQ14032 418 aaPredicted RBP21.66■■□□□ 1.06
SSU72-203ENST00000378725 SLC9C1Q4G0N8 1177 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 NSMFQ6X4W1 530 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 RNF207Q6ZRF8 634 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 TBC1D5Q92609 795 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 MAML3Q96JK9 1138 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 FLRT1Q9NZU1 646 aa21.66■■□□□ 1.06
SSU72-203ENST00000378725 POTEB2H3BUK9 544 aa21.65■■□□□ 1.06
SSU72-203ENST00000378725 LARGE1O95461 756 aa21.65■■□□□ 1.06
SSU72-203ENST00000378725 NOL8Q76FK4 1167 aaKnown RBP21.65■■□□□ 1.06
SSU72-203ENST00000378725 ZNF467Q7Z7K2 595 aaPredicted RBP21.65■■□□□ 1.06
SSU72-203ENST00000378725 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
SSU72-203ENST00000378725 SH3TC2Q8TF17 1288 aa21.65■■□□□ 1.06
SSU72-203ENST00000378725 FGD4Q96M96 766 aa21.65■■□□□ 1.06
SSU72-203ENST00000378725 RNF26Q9BY78 433 aaPredicted RBP21.65■■□□□ 1.06
SSU72-203ENST00000378725 MAP3K20Q9NYL2 800 aaKnown RBP21.65■■□□□ 1.06
SSU72-203ENST00000378725 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
SSU72-203ENST00000378725 PTPDC1A2A3K4 754 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 SOWAHBA6NEL2 793 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 CPLX1O14810 134 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 ST18O60284 1047 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 HMGCRP04035 888 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 RPS6P62753 249 aaKnown RBP21.64■■□□□ 1.05
SSU72-203ENST00000378725 CNTN2Q02246 1040 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 PKN1Q16512 942 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 PFKFB3Q16875 520 aaPredicted RBP21.64■■□□□ 1.05
SSU72-203ENST00000378725 CPLX2Q6PUV4 134 aaKnown RBP21.64■■□□□ 1.05
SSU72-203ENST00000378725 MSL3Q8N5Y2 521 aaKnown RBP21.64■■□□□ 1.05
SSU72-203ENST00000378725 PHKBQ93100 1093 aa21.64■■□□□ 1.05
SSU72-203ENST00000378725 ZSCAN31Q96LW9 406 aaPredicted RBP21.64■■□□□ 1.05
SSU72-203ENST00000378725 SMCHD1A6NHR9 2005 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 hCG_1984214I3L0E3 225 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 HSD17B4P51659 736 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 WWC2Q6AWC2 1192 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 MAMDC4Q6UXC1 1216 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms